RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 SAGE1Q9NXZ1 904 aa11.31□□□□□ -0.6
C19orf54-210ENST00000600139 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
C19orf54-210ENST00000600139 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
C19orf54-210ENST00000600139 SNAP23O00161 211 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 DGKZQ13574 1117 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 CCDC27Q2M243 656 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
C19orf54-210ENST00000600139 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 PLA2G12BQ9BX93 195 aa11.3□□□□□ -0.6
C19orf54-210ENST00000600139 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
C19orf54-210ENST00000600139 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 USP17L3A6NCW0 530 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 USP17L4A6NCW7 530 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 CSF1RP07333 972 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
C19orf54-210ENST00000600139 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
C19orf54-210ENST00000600139 CCDC30Q5VVM6 783 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 USP17L1Q7RTZ2 530 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
C19orf54-210ENST00000600139 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 ECM29Q5VYK3 1845 aa11.29□□□□□ -0.6
C19orf54-210ENST00000600139 WNT10BO00744 389 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 TRPA1O75762 1119 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 SASH1O94885 1247 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 GCKRQ14397 625 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 C2orf69Q8N8R5 385 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
C19orf54-210ENST00000600139 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
C19orf54-210ENST00000600139 MLLT1Q03111 559 aaPredicted RBP11.27□□□□□ -0.61
C19orf54-210ENST00000600139 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.61
C19orf54-210ENST00000600139 FZD1Q9UP38 647 aa11.27□□□□□ -0.61
C19orf54-210ENST00000600139 VAMP4O75379 141 aa11.26□□□□□ -0.61
C19orf54-210ENST00000600139 FOXO4P98177 505 aa11.26□□□□□ -0.61
C19orf54-210ENST00000600139 CALD1Q05682 793 aaKnown RBP11.26□□□□□ -0.61
C19orf54-210ENST00000600139 FLIIQ13045 1269 aa11.26□□□□□ -0.61
C19orf54-210ENST00000600139 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
C19orf54-210ENST00000600139 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
C19orf54-210ENST00000600139 CDC5LQ99459 802 aaKnown RBP11.26□□□□□ -0.61
C19orf54-210ENST00000600139 IL16Q14005 1332 aa11.26□□□□□ -0.61
C19orf54-210ENST00000600139 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
C19orf54-210ENST00000600139 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
C19orf54-210ENST00000600139 SLC4A2P04920 1241 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 ITGA6P23229 1130 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 FKBP1BP68106 108 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 CAP1Q01518 475 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 ZNF804BA4D1E1 1349 aa11.25□□□□□ -0.61
C19orf54-210ENST00000600139 RANBP2P49792 3224 aaKnown RBP11.24□□□□□ -0.61
C19orf54-210ENST00000600139 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
C19orf54-210ENST00000600139 SOX10P56693 466 aa11.24□□□□□ -0.61
C19orf54-210ENST00000600139 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
C19orf54-210ENST00000600139 CHRNDQ07001 517 aa11.24□□□□□ -0.61
C19orf54-210ENST00000600139 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
C19orf54-210ENST00000600139 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
C19orf54-210ENST00000600139 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
C19orf54-210ENST00000600139 LEMD3Q9Y2U8 911 aa11.24□□□□□ -0.61
C19orf54-210ENST00000600139 F6X3S4 739 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 TM4SF4P48230 202 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
C19orf54-210ENST00000600139 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 ZNF296Q8WUU4 475 aaPredicted RBP11.23□□□□□ -0.61
C19orf54-210ENST00000600139 DNAAF4Q8WXU2 420 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 CD209Q9NNX6 404 aa11.23□□□□□ -0.61
C19orf54-210ENST00000600139 TAF5LO75529 589 aa11.22□□□□□ -0.61
C19orf54-210ENST00000600139 TBC1D8O95759 1140 aa11.22□□□□□ -0.61
C19orf54-210ENST00000600139 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
C19orf54-210ENST00000600139 GJA5P36382 358 aa11.22□□□□□ -0.61
C19orf54-210ENST00000600139 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
C19orf54-210ENST00000600139 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
C19orf54-210ENST00000600139 CLMNQ96JQ2 1002 aa11.22□□□□□ -0.61
C19orf54-210ENST00000600139 CFHR5Q9BXR6 569 aa11.22□□□□□ -0.61
C19orf54-210ENST00000600139 SZT2Q5T011 3432 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 MYO3BQ8WXR4 1341 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 IL1R1P14778 569 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 GTF2IP78347 998 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.61
C19orf54-210ENST00000600139 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
C19orf54-210ENST00000600139 GRIK5Q16478 980 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.61
C19orf54-210ENST00000600139 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 ZNF594Q96JF6 807 aaPredicted RBP11.21□□□□□ -0.61
C19orf54-210ENST00000600139 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
C19orf54-210ENST00000600139 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
C19orf54-210ENST00000600139 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 280.7 ms