RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
FARP1-226ENST00000599040 TRPM4Q8TD43 1214 aa11.7□□□□□ -0.54
FARP1-226ENST00000599040 DCPSQ96C86 337 aaKnown RBP11.7□□□□□ -0.54
FARP1-226ENST00000599040 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
FARP1-226ENST00000599040 CAPNS2Q96L46 248 aa11.7□□□□□ -0.54
FARP1-226ENST00000599040 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
FARP1-226ENST00000599040 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
FARP1-226ENST00000599040 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
FARP1-226ENST00000599040 ZNF609O15014 1411 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 MED23Q9ULK4 1368 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 COL4A1P02462 1669 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 H7C1W4 665 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 FOXN1O15353 648 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
FARP1-226ENST00000599040 TBC1D10BQ4KMP7 808 aaPredicted RBP11.69□□□□□ -0.54
FARP1-226ENST00000599040 CST9Q5W186 159 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
FARP1-226ENST00000599040 MPHOSPH8Q99549 860 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 GREM2Q9H772 168 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
FARP1-226ENST00000599040 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 PSME4Q14997 1843 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 SPEF2Q9C093 1822 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 MAP2K2P36507 400 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 HIRAP54198 1017 aaPredicted RBP11.68□□□□□ -0.54
FARP1-226ENST00000599040 GRM1Q13255 1194 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 KIF4BQ2VIQ3 1234 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 RSBN1LQ6PCB5 846 aaPredicted RBP11.68□□□□□ -0.54
FARP1-226ENST00000599040 CENPQQ7L2Z9 268 aaPredicted RBP11.68□□□□□ -0.54
FARP1-226ENST00000599040 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 ZNF408Q9H9D4 720 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
FARP1-226ENST00000599040 MYO3BQ8WXR4 1341 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 SCN9AQ15858 1988 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 ITGA6P23229 1130 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 MMP14P50281 582 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
FARP1-226ENST00000599040 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
FARP1-226ENST00000599040 CYP4F22Q6NT55 531 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 SAPCD2Q86UD0 394 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 TMEM57Q8N5G2 664 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
FARP1-226ENST00000599040 MINPP1Q9UNW1 487 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
FARP1-226ENST00000599040 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 ANKRD18BA2A2Z9 1011 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 CA12O43570 354 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 KCNJ4P48050 445 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 OGFOD1Q8N543 542 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 C2orf69Q8N8R5 385 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 KCNQ5Q9NR82 932 aa11.66□□□□□ -0.54
FARP1-226ENST00000599040 CSF1RP07333 972 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 RLBP1P12271 317 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 HUNKP57058 714 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 ZNF280AP59817 542 aaPredicted RBP11.65□□□□□ -0.54
FARP1-226ENST00000599040 IFIT5Q13325 482 aaKnown RBP11.65□□□□□ -0.54
FARP1-226ENST00000599040 FAM161AQ3B820 660 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 INTS3Q68E01 1043 aaKnown RBP11.65□□□□□ -0.54
FARP1-226ENST00000599040 SLC4A10Q6U841 1118 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 GGA3Q9NZ52 723 aa11.65□□□□□ -0.54
FARP1-226ENST00000599040 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.55
FARP1-226ENST00000599040 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 CAPN15O75808 1086 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
FARP1-226ENST00000599040 LBX1P52954 281 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 CASP7P55210 303 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 NOGQ13253 232 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 STRIP1Q5VSL9 837 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 FBXW7Q969H0 707 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 GBA2Q9HCG7 927 aaPredicted RBP11.64□□□□□ -0.55
FARP1-226ENST00000599040 MYOZ2Q9NPC6 264 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 C9orf78Q9NZ63 289 aaPredicted RBP11.64□□□□□ -0.55
FARP1-226ENST00000599040 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
FARP1-226ENST00000599040 PITPNM2Q9BZ72 1349 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 ALDH1L1O75891 902 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 EGFRP00533 1210 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 GNAI3P08754 354 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 SCARF1Q14162 830 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 CCDC57Q2TAC2 916 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 CCDC102AQ96A19 550 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 HDAC9Q9UKV0 1011 aa11.63□□□□□ -0.55
FARP1-226ENST00000599040 ADM5C9JUS6 153 aa11.62□□□□□ -0.55
FARP1-226ENST00000599040 F6X3S4 739 aa11.62□□□□□ -0.55
FARP1-226ENST00000599040 GRM8O00222 908 aa11.62□□□□□ -0.55
FARP1-226ENST00000599040 CHRNDQ07001 517 aa11.62□□□□□ -0.55
FARP1-226ENST00000599040 GMLQ99445 158 aa11.62□□□□□ -0.55
FARP1-226ENST00000599040 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
FARP1-226ENST00000599040 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms