RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 RGS3P49796 1198 aa23.63■■□□□ 1.37
LTBP4-223ENST00000598717 CCDC158Q5M9N0 1113 aa23.63■■□□□ 1.37
LTBP4-223ENST00000598717 SUPT20HQ8NEM7 779 aa23.63■■□□□ 1.37
LTBP4-223ENST00000598717 EYA3Q99504 573 aa23.63■■□□□ 1.37
LTBP4-223ENST00000598717 TLR7Q9NYK1 1049 aaKnown RBP23.63■■□□□ 1.37
LTBP4-223ENST00000598717 CAVIN4Q5BKX8 364 aa23.62■■□□□ 1.37
LTBP4-223ENST00000598717 BRCA1P38398 1863 aaKnown RBP23.62■■□□□ 1.37
LTBP4-223ENST00000598717 A0A1B0GUL6 1792 aa23.61■■□□□ 1.37
LTBP4-223ENST00000598717 SKAP1Q86WV1 359 aa23.61■■□□□ 1.37
LTBP4-223ENST00000598717 VPS37DQ86XT2 251 aa23.61■■□□□ 1.37
LTBP4-223ENST00000598717 PLEKHM2Q8IWE5 1019 aa23.61■■□□□ 1.37
LTBP4-223ENST00000598717 ECHDC1Q9NTX5 307 aa23.61■■□□□ 1.37
LTBP4-223ENST00000598717 TTC41PQ6P2S7 1318 aa23.6■■□□□ 1.37
LTBP4-223ENST00000598717 PDE1AP54750 535 aa23.6■■□□□ 1.37
LTBP4-223ENST00000598717 TTC39AQ5SRH9 613 aa23.6■■□□□ 1.37
LTBP4-223ENST00000598717 C15orf52Q6ZUT6 534 aaKnown RBP23.6■■□□□ 1.37
LTBP4-223ENST00000598717 PELP1Q8IZL8 1130 aaKnown RBP23.6■■□□□ 1.37
LTBP4-223ENST00000598717 GPR101Q96P66 508 aaPredicted RBP23.6■■□□□ 1.37
LTBP4-223ENST00000598717 RTFDC1Q9BY42 306 aaPredicted RBP23.6■■□□□ 1.37
LTBP4-223ENST00000598717 ZC3H12CQ9C0D7 883 aaKnown RBP23.6■■□□□ 1.37
LTBP4-223ENST00000598717 SALL3Q9BXA9 1300 aa23.59■■□□□ 1.37
LTBP4-223ENST00000598717 ERC2O15083 957 aa23.59■■□□□ 1.37
LTBP4-223ENST00000598717 WASHC4Q2M389 1173 aa23.59■■□□□ 1.37
LTBP4-223ENST00000598717 PSMD1Q99460 953 aa23.59■■□□□ 1.37
LTBP4-223ENST00000598717 GNL3LQ9NVN8 582 aaKnown RBP23.59■■□□□ 1.37
LTBP4-223ENST00000598717 STAP2Q9UGK3 403 aa23.59■■□□□ 1.37
LTBP4-223ENST00000598717 MED23Q9ULK4 1368 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 RIMBP2O15034 1052 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 KLRK1P26718 216 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 HIBADHP31937 336 aaKnown RBP23.58■■□□□ 1.37
LTBP4-223ENST00000598717 GYG1P46976 350 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 BCAMP50895 628 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
LTBP4-223ENST00000598717 CCDC102BQ68D86 513 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 ZNF804AQ7Z570 1209 aa23.58■■□□□ 1.37
LTBP4-223ENST00000598717 FAM84BQ96KN1 310 aaPredicted RBP23.58■■□□□ 1.37
LTBP4-223ENST00000598717 LTBP1Q14766 1721 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 G3V3G9 751 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 DCAF8Q5TAQ9 597 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 OSBPL3Q9H4L5 887 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 SNED1Q8TER0 1413 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 AOX1Q06278 1338 aa23.57■■□□□ 1.36
LTBP4-223ENST00000598717 UQCRFS1P1P0C7P4 283 aa23.56■■□□□ 1.36
LTBP4-223ENST00000598717 PHKA1P46020 1223 aa23.56■■□□□ 1.36
LTBP4-223ENST00000598717 FBXO33Q7Z6M2 555 aa23.56■■□□□ 1.36
LTBP4-223ENST00000598717 TXNRD3Q86VQ6 643 aa23.56■■□□□ 1.36
LTBP4-223ENST00000598717 TAOK3Q9H2K8 898 aa23.56■■□□□ 1.36
LTBP4-223ENST00000598717 IRS2Q9Y4H2 1338 aa23.56■■□□□ 1.36
LTBP4-223ENST00000598717 GLRX3O76003 335 aaKnown RBP23.55■■□□□ 1.36
LTBP4-223ENST00000598717 ATP5JP18859 108 aa23.55■■□□□ 1.36
LTBP4-223ENST00000598717 DUOX1Q9NRD9 1551 aa23.55■■□□□ 1.36
LTBP4-223ENST00000598717 ARAP2Q8WZ64 1704 aa23.54■■□□□ 1.36
LTBP4-223ENST00000598717 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
LTBP4-223ENST00000598717 ARHGAP27Q6ZUM4 889 aa23.54■■□□□ 1.36
LTBP4-223ENST00000598717 ZNF512BQ96KM6 892 aaPredicted RBP23.54■■□□□ 1.36
LTBP4-223ENST00000598717 VPS33BQ9H267 617 aa23.54■■□□□ 1.36
LTBP4-223ENST00000598717 PPIP5K2O43314 1243 aa23.53■■□□□ 1.36
LTBP4-223ENST00000598717 ARID4AP29374 1257 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-223ENST00000598717 GPR162Q16538 588 aa23.53■■□□□ 1.36
LTBP4-223ENST00000598717 PI4K2BQ8TCG2 481 aa23.53■■□□□ 1.36
LTBP4-223ENST00000598717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.53■■□□□ 1.36
LTBP4-223ENST00000598717 COA1Q9GZY4 146 aa23.53■■□□□ 1.36
LTBP4-223ENST00000598717 BOLA2Q9H3K6 86 aa23.53■■□□□ 1.36
LTBP4-223ENST00000598717 ARFGEF1Q9Y6D6 1849 aa23.53■■□□□ 1.36
LTBP4-223ENST00000598717 KIAA2012Q0VF49 1180 aa23.52■■□□□ 1.36
LTBP4-223ENST00000598717 AOC3Q16853 763 aa23.52■■□□□ 1.36
LTBP4-223ENST00000598717 ZNF277Q9NRM2 450 aaPredicted RBP23.52■■□□□ 1.36
LTBP4-223ENST00000598717 NFKBIEO00221 500 aa23.51■■□□□ 1.35
LTBP4-223ENST00000598717 YBX3P16989 372 aaKnown RBP eCLIP23.51■■□□□ 1.356e-6■□□□□ 10.6
LTBP4-223ENST00000598717 LARGE2Q8N3Y3 721 aa23.51■■□□□ 1.35
LTBP4-223ENST00000598717 CD209Q9NNX6 404 aa23.51■■□□□ 1.35
LTBP4-223ENST00000598717 IQSEC3Q9UPP2 1182 aaPredicted RBP23.51■■□□□ 1.35
LTBP4-223ENST00000598717 LTBP3Q9NS15 1303 aa23.51■■□□□ 1.35
LTBP4-223ENST00000598717 SEMA3EO15041 775 aa23.5■■□□□ 1.35
LTBP4-223ENST00000598717 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
LTBP4-223ENST00000598717 DOK7Q18PE1 504 aa23.5■■□□□ 1.35
LTBP4-223ENST00000598717 TTC22Q5TAA0 569 aa23.5■■□□□ 1.35
LTBP4-223ENST00000598717 DENND2AQ9ULE3 1009 aa23.5■■□□□ 1.35
LTBP4-223ENST00000598717 MCAMP43121 646 aa23.49■■□□□ 1.35
LTBP4-223ENST00000598717 TDRD7Q8NHU6 1098 aaKnown RBP23.49■■□□□ 1.35
LTBP4-223ENST00000598717 DNAJC2Q99543 621 aaKnown RBP23.49■■□□□ 1.35
LTBP4-223ENST00000598717 HAUS7Q99871 368 aa23.49■■□□□ 1.35
LTBP4-223ENST00000598717 IL1R1P14778 569 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 RASSF7Q02833 373 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 RASGRF1Q13972 1273 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 PODNQ7Z5L7 613 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 SPATA5Q8NB90 893 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 DBNDD1Q9H9R9 158 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 SNRKQ9NRH2 765 aa23.48■■□□□ 1.35
LTBP4-223ENST00000598717 FER1L6Q2WGJ9 1857 aa23.47■■□□□ 1.35
LTBP4-223ENST00000598717 TRIM6-TRIM34B2RNG4 842 aa23.47■■□□□ 1.35
LTBP4-223ENST00000598717 SCARF1Q14162 830 aa23.47■■□□□ 1.35
LTBP4-223ENST00000598717 HMG20BQ9P0W2 317 aa23.47■■□□□ 1.35
LTBP4-223ENST00000598717 ZBTB22O15209 634 aa23.46■■□□□ 1.35
LTBP4-223ENST00000598717 ECE2O60344 883 aa23.46■■□□□ 1.35
LTBP4-223ENST00000598717 GRIN3BO60391 1043 aa23.46■■□□□ 1.35
LTBP4-223ENST00000598717 MAP4K4O95819 1239 aaPredicted RBP23.46■■□□□ 1.35
LTBP4-223ENST00000598717 CHAF1AQ13111 956 aaPredicted RBP23.46■■□□□ 1.35
LTBP4-223ENST00000598717 NIM1KQ8IY84 436 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms