RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZNF594Q96JF6 807 aaPredicted RBP19.05■□□□□ 0.64
LIG1-215ENST00000597901 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
LIG1-215ENST00000597901 UTYO14607 1347 aa19.04■□□□□ 0.64
LIG1-215ENST00000597901 SNAP23O00161 211 aa19.04■□□□□ 0.64
LIG1-215ENST00000597901 CELF2O95319 508 aaKnown RBP19.04■□□□□ 0.64
LIG1-215ENST00000597901 KLRK1P26718 216 aa19.04■□□□□ 0.64
LIG1-215ENST00000597901 KCNJ4P48050 445 aa19.04■□□□□ 0.64
LIG1-215ENST00000597901 LDHAL6AQ6ZMR3 332 aa19.04■□□□□ 0.64
LIG1-215ENST00000597901 USP17L8P0C7I0 530 aa19.03■□□□□ 0.64
LIG1-215ENST00000597901 KIF4BQ2VIQ3 1234 aa19.03■□□□□ 0.64
LIG1-215ENST00000597901 TAF7LQ5H9L4 462 aa19.03■□□□□ 0.64
LIG1-215ENST00000597901 DACT2Q5SW24 774 aa19.03■□□□□ 0.64
LIG1-215ENST00000597901 DLK2Q6UY11 383 aa19.03■□□□□ 0.64
LIG1-215ENST00000597901 DCPSQ96C86 337 aaKnown RBP19.03■□□□□ 0.64
LIG1-215ENST00000597901 TLL2Q9Y6L7 1015 aa19.03■□□□□ 0.64
LIG1-215ENST00000597901 CT47B1P0C2W7 299 aaPredicted RBP19.02■□□□□ 0.64
LIG1-215ENST00000597901 STRIP1Q5VSL9 837 aa19.02■□□□□ 0.64
LIG1-215ENST00000597901 MXD3Q9BW11 206 aa19.02■□□□□ 0.64
LIG1-215ENST00000597901 CNNM1Q9NRU3 951 aa19.02■□□□□ 0.64
LIG1-215ENST00000597901 SMC4Q9NTJ3 1288 aa19.02■□□□□ 0.64
LIG1-215ENST00000597901 WDR33Q9C0J8 1336 aaKnown RBP19.01■□□□□ 0.63
LIG1-215ENST00000597901 PLIN1O60240 522 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 SCARF1Q14162 830 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 TTLL5Q6EMB2 1281 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 C15orf52Q6ZUT6 534 aaKnown RBP19.01■□□□□ 0.63
LIG1-215ENST00000597901 KRT26Q7Z3Y9 468 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 MIER1Q8N108 512 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 USP44Q9H0E7 712 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 ZNF408Q9H9D4 720 aa19.01■□□□□ 0.63
LIG1-215ENST00000597901 DIEXFQ68CQ4 756 aaKnown RBP19■□□□□ 0.63
LIG1-215ENST00000597901 PAXIP1Q6ZW49 1069 aaPredicted RBP19■□□□□ 0.63
LIG1-215ENST00000597901 SAPCD2Q86UD0 394 aa19■□□□□ 0.63
LIG1-215ENST00000597901 FBXW7Q969H0 707 aa19■□□□□ 0.63
LIG1-215ENST00000597901 BICC1Q9H694 974 aaKnown RBP19■□□□□ 0.63
LIG1-215ENST00000597901 CD209Q9NNX6 404 aa19■□□□□ 0.63
LIG1-215ENST00000597901 MYOZ2Q9NPC6 264 aa19■□□□□ 0.63
LIG1-215ENST00000597901 IRS2Q9Y4H2 1338 aa19■□□□□ 0.63
LIG1-215ENST00000597901 GTF2IP78347 998 aa18.99■□□□□ 0.63
LIG1-215ENST00000597901 RABL6Q3YEC7 729 aaPredicted RBP18.99■□□□□ 0.63
LIG1-215ENST00000597901 PUS3Q9BZE2 481 aaKnown RBP18.99■□□□□ 0.63
LIG1-215ENST00000597901 NOB1Q9ULX3 412 aaKnown RBP18.99■□□□□ 0.63
LIG1-215ENST00000597901 ASTN2O75129 1339 aaPredicted RBP18.99■□□□□ 0.63
LIG1-215ENST00000597901 ECE1P42892 770 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 CYP4F22Q6NT55 531 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 OGFOD1Q8N543 542 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 CAPNS2Q96L46 248 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 WBP1LQ9NX94 342 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 ZNF609O15014 1411 aa18.98■□□□□ 0.63
LIG1-215ENST00000597901 ADM5C9JUS6 153 aa18.97■□□□□ 0.63
LIG1-215ENST00000597901 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
LIG1-215ENST00000597901 ANGEL2Q5VTE6 544 aaKnown RBP18.97■□□□□ 0.63
LIG1-215ENST00000597901 SULF1Q8IWU6 871 aa18.97■□□□□ 0.63
LIG1-215ENST00000597901 GGA3Q9NZ52 723 aa18.97■□□□□ 0.63
LIG1-215ENST00000597901 RIPOR2Q9Y4F9 1068 aa18.97■□□□□ 0.63
LIG1-215ENST00000597901 MYO3BQ8WXR4 1341 aa18.97■□□□□ 0.63
LIG1-215ENST00000597901 MYH3P11055 1940 aa18.96■□□□□ 0.63
LIG1-215ENST00000597901 SCN9AQ15858 1988 aa18.96■□□□□ 0.63
LIG1-215ENST00000597901 CTCFP49711 727 aaPredicted RBP18.96■□□□□ 0.63
LIG1-215ENST00000597901 MMP14P50281 582 aa18.96■□□□□ 0.63
LIG1-215ENST00000597901 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
LIG1-215ENST00000597901 GRM1Q13255 1194 aa18.96■□□□□ 0.63
LIG1-215ENST00000597901 HHIPL1Q96JK4 782 aa18.96■□□□□ 0.63
LIG1-215ENST00000597901 FOXN1O15353 648 aa18.95■□□□□ 0.62
LIG1-215ENST00000597901 IL1R1P14778 569 aa18.95■□□□□ 0.62
LIG1-215ENST00000597901 RARSP54136 660 aaKnown RBP18.95■□□□□ 0.62
LIG1-215ENST00000597901 UBE4AQ14139 1066 aa18.95■□□□□ 0.62
LIG1-215ENST00000597901 NBPF9Q3BBW0 867 aa18.95■□□□□ 0.62
LIG1-215ENST00000597901 ZNF804AQ7Z570 1209 aa18.95■□□□□ 0.62
LIG1-215ENST00000597901 CAPN15O75808 1086 aa18.94■□□□□ 0.62
LIG1-215ENST00000597901 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
LIG1-215ENST00000597901 C2orf69Q8N8R5 385 aa18.94■□□□□ 0.62
LIG1-215ENST00000597901 BEGAINQ9BUH8 593 aa18.94■□□□□ 0.62
LIG1-215ENST00000597901 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
LIG1-215ENST00000597901 MAP2K2P36507 400 aa18.93■□□□□ 0.62
LIG1-215ENST00000597901 HUNKP57058 714 aa18.93■□□□□ 0.62
LIG1-215ENST00000597901 LRRC24Q50LG9 513 aa18.93■□□□□ 0.62
LIG1-215ENST00000597901 GBA2Q9HCG7 927 aaPredicted RBP18.93■□□□□ 0.62
LIG1-215ENST00000597901 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
LIG1-215ENST00000597901 HDAC9Q9UKV0 1011 aa18.93■□□□□ 0.62
LIG1-215ENST00000597901 MROH5Q6ZUA9 1318 aa18.93■□□□□ 0.62
LIG1-215ENST00000597901 WNT10BO00744 389 aa18.92■□□□□ 0.62
LIG1-215ENST00000597901 AOC2O75106 756 aa18.92■□□□□ 0.62
LIG1-215ENST00000597901 SASH1O94885 1247 aa18.92■□□□□ 0.62
LIG1-215ENST00000597901 CERS5Q8N5B7 392 aa18.92■□□□□ 0.62
LIG1-215ENST00000597901 CDCA5Q96FF9 252 aa18.92■□□□□ 0.62
LIG1-215ENST00000597901 FAM84BQ96KN1 310 aaPredicted RBP18.92■□□□□ 0.62
LIG1-215ENST00000597901 HIBADHP31937 336 aaKnown RBP18.91■□□□□ 0.62
LIG1-215ENST00000597901 TDRD7Q8NHU6 1098 aaKnown RBP18.91■□□□□ 0.62
LIG1-215ENST00000597901 KLHDC4Q8TBB5 520 aa18.91■□□□□ 0.62
LIG1-215ENST00000597901 ARHGAP45Q92619 1136 aa18.91■□□□□ 0.62
LIG1-215ENST00000597901 SCAF8Q9UPN6 1271 aaKnown RBP18.91■□□□□ 0.62
LIG1-215ENST00000597901 PITPNM2Q9BZ72 1349 aa18.91■□□□□ 0.62
LIG1-215ENST00000597901 GYG1P46976 350 aa18.9■□□□□ 0.62
LIG1-215ENST00000597901 FKBP1AP62942 108 aaKnown RBP18.9■□□□□ 0.62
LIG1-215ENST00000597901 METTL24Q5JXM2 366 aa18.9■□□□□ 0.62
LIG1-215ENST00000597901 ZBED3Q96IU2 234 aaPredicted RBP18.9■□□□□ 0.62
LIG1-215ENST00000597901 SPEF2Q9C093 1822 aa18.89■□□□□ 0.61
LIG1-215ENST00000597901 PDE8BO95263 885 aa18.89■□□□□ 0.61
LIG1-215ENST00000597901 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms