RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 HDAC5Q9UQL6 1122 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 RIPOR2Q9Y4F9 1068 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 PCNTO95613 3336 aa11.52□□□□□ -0.57
DNMT1-223ENST00000591239 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
DNMT1-223ENST00000591239 GNAI3P08754 354 aa11.51□□□□□ -0.57
DNMT1-223ENST00000591239 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
DNMT1-223ENST00000591239 KLRK1P26718 216 aa11.51□□□□□ -0.57
DNMT1-223ENST00000591239 APLP1P51693 650 aa11.51□□□□□ -0.57
DNMT1-223ENST00000591239 KLHDC4Q8TBB5 520 aa11.51□□□□□ -0.57
DNMT1-223ENST00000591239 COA1Q9GZY4 146 aa11.51□□□□□ -0.57
DNMT1-223ENST00000591239 LRRFIP2Q9Y608 721 aaKnown RBP11.51□□□□□ -0.57
DNMT1-223ENST00000591239 SHTN1A0MZ66 631 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 H7C1D1 291 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
DNMT1-223ENST00000591239 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
DNMT1-223ENST00000591239 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 IRS2Q9Y4H2 1338 aa11.5□□□□□ -0.57
DNMT1-223ENST00000591239 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
DNMT1-223ENST00000591239 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
DNMT1-223ENST00000591239 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
DNMT1-223ENST00000591239 UBE4AQ14139 1066 aa11.49□□□□□ -0.57
DNMT1-223ENST00000591239 METTL24Q5JXM2 366 aa11.49□□□□□ -0.57
DNMT1-223ENST00000591239 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
DNMT1-223ENST00000591239 FTSJ3Q8IY81 847 aaKnown RBP11.49□□□□□ -0.57
DNMT1-223ENST00000591239 DZIP1LQ8IYY4 767 aaKnown RBP11.49□□□□□ -0.57
DNMT1-223ENST00000591239 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
DNMT1-223ENST00000591239 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-223ENST00000591239 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-223ENST00000591239 HTRA3P83110 453 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 STRIP1Q5VSL9 837 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 GMLQ99445 158 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 A0A1B0GUL6 1792 aa11.48□□□□□ -0.57
DNMT1-223ENST00000591239 ZNF609O15014 1411 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 PASKQ96RG2 1323 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 EYA2O00167 538 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 PDE8BO95263 885 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 GNAI2P04899 355 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 RLBP1P12271 317 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 TBC1D10BQ4KMP7 808 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-223ENST00000591239 DACT2Q5SW24 774 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 TTLL5Q6EMB2 1281 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 VGLL2Q8N8G2 317 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 RCAN3Q9UKA8 241 aa11.47□□□□□ -0.57
DNMT1-223ENST00000591239 PSME4Q14997 1843 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 EGFRP00533 1210 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 USP17L8P0C7I0 530 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 IL1R1P14778 569 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
DNMT1-223ENST00000591239 GTF2IP78347 998 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 MTX1Q13505 466 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 ITPRIPQ8IWB1 547 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
DNMT1-223ENST00000591239 FAM84BQ96KN1 310 aaPredicted RBP11.46□□□□□ -0.57
DNMT1-223ENST00000591239 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 SIL1Q9H173 461 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
DNMT1-223ENST00000591239 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
DNMT1-223ENST00000591239 CIAO1O76071 339 aa11.45□□□□□ -0.58
DNMT1-223ENST00000591239 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
DNMT1-223ENST00000591239 GYG1P46976 350 aa11.45□□□□□ -0.58
DNMT1-223ENST00000591239 PUM3Q15397 648 aaKnown RBP11.45□□□□□ -0.58
DNMT1-223ENST00000591239 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
DNMT1-223ENST00000591239 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
DNMT1-223ENST00000591239 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
DNMT1-223ENST00000591239 COPRSQ9NQ92 184 aa11.45□□□□□ -0.58
DNMT1-223ENST00000591239 PA2G4Q9UQ80 394 aaKnown RBP11.45□□□□□ -0.58
DNMT1-223ENST00000591239 ZBTB7BO15156 539 aaPredicted RBP11.44□□□□□ -0.58
DNMT1-223ENST00000591239 SASH1O94885 1247 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 MS4A1P11836 297 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 FGFR2P21802 821 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 FBXO33Q7Z6M2 555 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 VPS37DQ86XT2 251 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 OGFOD1Q8N543 542 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
DNMT1-223ENST00000591239 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
DNMT1-223ENST00000591239 PNMA6EA0A0J9YXQ4 647 aa11.43□□□□□ -0.58
DNMT1-223ENST00000591239 TMEM88BA6NKF7 163 aa11.43□□□□□ -0.58
DNMT1-223ENST00000591239 TRAF5O00463 557 aa11.43□□□□□ -0.58
DNMT1-223ENST00000591239 IFIT1P09914 478 aaKnown RBP11.43□□□□□ -0.58
DNMT1-223ENST00000591239 IL15P40933 162 aaPredicted RBP11.43□□□□□ -0.58
DNMT1-223ENST00000591239 FMR1Q06787 632 aaKnown RBP eCLIP11.43□□□□□ -0.582e-9■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms