RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 MBD5Q9P267 1494 aa13.26□□□□□ -0.29
SEH1L-208ENST00000590843 CARMIL3Q8ND23 1372 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 PARD3Q8TEW0 1356 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 ANXA1P04083 346 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 CETN1Q12798 172 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 ODR4Q5SWX8 454 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
SEH1L-208ENST00000590843 SPATA31A1Q5TZJ5 1347 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 C21orf2O43822 256 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 VEGFAP15692 232 aaPredicted RBP13.25□□□□□ -0.29
SEH1L-208ENST00000590843 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 F6X3S4 739 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
SEH1L-208ENST00000590843 VAT1LQ9HCJ6 419 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 SNRKQ9NRH2 765 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
SEH1L-208ENST00000590843 TGFB2P61812 414 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
SEH1L-208ENST00000590843 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 FILIP1LQ4L180 1135 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 PIBF1Q8WXW3 757 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
SEH1L-208ENST00000590843 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
SEH1L-208ENST00000590843 ADGRB3O60242 1522 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 PYM1Q9BRP8 204 aaKnown RBP13.24□□□□□ -0.29
SEH1L-208ENST00000590843 USP6P35125 1406 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 BACH1O14867 736 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 SEMA3EO15041 775 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 LMNB1P20700 586 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 FOSBP53539 338 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 NCOA7Q8NI08 942 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 BRIP1Q9BX63 1249 aa13.24□□□□□ -0.29
SEH1L-208ENST00000590843 RC3H1Q5TC82 1133 aaKnown RBP13.24□□□□□ -0.29
SEH1L-208ENST00000590843 EYA2O00167 538 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 DNM2P50570 870 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
SEH1L-208ENST00000590843 GNPTABQ3T906 1256 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
SEH1L-208ENST00000590843 SLC9C2Q5TAH2 1124 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 RETREG2Q8NC44 543 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
SEH1L-208ENST00000590843 TMEM67Q5HYA8 995 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 KCNG1Q9UIX4 513 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 RTL9Q8NET4 1388 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 KDM4AO75164 1064 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 RAET1EQ8TD07 263 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
SEH1L-208ENST00000590843 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
SEH1L-208ENST00000590843 HELBQ8NG08 1087 aaPredicted RBP13.22□□□□□ -0.29
SEH1L-208ENST00000590843 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 PLEKHG2Q9H7P9 1386 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 WTAPQ15007 396 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 MFSD14CQ5VZR4 134 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
SEH1L-208ENST00000590843 KIAA0825Q8IV33 1275 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 CCDC82Q8N4S0 544 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 CEP170BQ9Y4F5 1589 aaPredicted RBP13.22□□□□□ -0.29
SEH1L-208ENST00000590843 BICD1Q96G01 975 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 ZFYVE28Q9HCC9 887 aa13.22□□□□□ -0.29
SEH1L-208ENST00000590843 GRAPQ13588 217 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 TTLL7Q6ZT98 887 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 GRAPLQ8TC17 118 aaPredicted RBP13.21□□□□□ -0.29
SEH1L-208ENST00000590843 TSG101Q99816 390 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 COPB2P35606 906 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 MMP14P50281 582 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 AMPD3Q01432 767 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 GCKRQ14397 625 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 FGFR1OPO95684 399 aaKnown RBP13.21□□□□□ -0.29
SEH1L-208ENST00000590843 ALDH1A1P00352 501 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
SEH1L-208ENST00000590843 CTSWP56202 376 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 NUCB2P80303 420 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 DEFB132Q7Z7B7 95 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 ASAP1Q9ULH1 1129 aa13.21□□□□□ -0.29
SEH1L-208ENST00000590843 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.3
SEH1L-208ENST00000590843 CETN2P41208 172 aa13.21□□□□□ -0.3
SEH1L-208ENST00000590843 ANGEL1Q9UNK9 670 aaKnown RBP13.21□□□□□ -0.3
SEH1L-208ENST00000590843 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 PRC1O43663 620 aa13.2□□□□□ -0.3
SEH1L-208ENST00000590843 UBE4AQ14139 1066 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms