RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZNF512BQ96KM6 892 aaPredicted RBP22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 CNNM1Q9NRU3 951 aa22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 MYH7P12883 1935 aa22.65■■□□□ 1.22
PRKCSH-209ENST00000589838 E7EWF7 191 aa22.65■■□□□ 1.22
PRKCSH-209ENST00000589838 AGXT2Q9BYV1 514 aa22.65■■□□□ 1.22
PRKCSH-209ENST00000589838 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.65■■□□□ 1.223e-7■■■□□ 14.7
PRKCSH-209ENST00000589838 M0R2C6 588 aa22.64■■□□□ 1.22
PRKCSH-209ENST00000589838 WASHC4Q2M389 1173 aa22.64■■□□□ 1.22
PRKCSH-209ENST00000589838 ZSCAN30Q86W11 494 aa22.64■■□□□ 1.22
PRKCSH-209ENST00000589838 APPBP2Q92624 585 aa22.64■■□□□ 1.22
PRKCSH-209ENST00000589838 OSBP2Q969R2 916 aa22.64■■□□□ 1.22
PRKCSH-209ENST00000589838 GREM2Q9H772 168 aa22.64■■□□□ 1.22
PRKCSH-209ENST00000589838 RIC1Q4ADV7 1423 aa22.64■■□□□ 1.21
PRKCSH-209ENST00000589838 DOT1LQ8TEK3 1739 aa22.64■■□□□ 1.21
PRKCSH-209ENST00000589838 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.21
PRKCSH-209ENST00000589838 TTF1Q15361 905 aaPredicted RBP22.64■■□□□ 1.21
PRKCSH-209ENST00000589838 ZSCAN16Q9H4T2 348 aaPredicted RBP22.64■■□□□ 1.21
PRKCSH-209ENST00000589838 SLFNL1Q499Z3 407 aa22.63■■□□□ 1.21
PRKCSH-209ENST00000589838 ZNF34Q8IZ26 560 aa22.63■■□□□ 1.21
PRKCSH-209ENST00000589838 SMARCC2Q8TAQ2 1214 aa22.63■■□□□ 1.21
PRKCSH-209ENST00000589838 H3BQV1 296 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 ZAP70P43403 619 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 IMMTQ16891 758 aaKnown RBP22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 FERMT3Q86UX7 667 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 FBXL16Q8N461 479 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 RNF214Q8ND24 703 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 SYNE4Q8N205 404 aa22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 ZNF274Q96GC6 653 aaPredicted RBP22.62■■□□□ 1.21
PRKCSH-209ENST00000589838 DTNBO60941 627 aa22.61■■□□□ 1.21
PRKCSH-209ENST00000589838 SCRN1Q12765 414 aa22.61■■□□□ 1.21
PRKCSH-209ENST00000589838 JAK2O60674 1132 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 MSNP26038 577 aaKnown RBP22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 DDB1Q16531 1140 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 TTC6Q86TZ1 520 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 LRRC2Q9BYS8 371 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 TBC1D2BQ9UPU7 963 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 GOLGA6L4A6NEF3 574 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 PDE8BO95263 885 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 UQCRFS1P1P0C7P4 283 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 SPATA32Q96LK8 384 aa22.6■■□□□ 1.21
PRKCSH-209ENST00000589838 SPATA31A1Q5TZJ5 1347 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 EIF5P55010 431 aaKnown RBP22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 SCARF1Q14162 830 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 NAA16Q6N069 864 aaPredicted RBP22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 VGLL2Q8N8G2 317 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 CCDC39Q9UFE4 941 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 MROH5Q6ZUA9 1318 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 AKAP11Q9UKA4 1901 aa22.59■■□□□ 1.21
PRKCSH-209ENST00000589838 APOBRQ0VD83 1088 aa22.58■■□□□ 1.21
PRKCSH-209ENST00000589838 NSUN7Q8NE18 718 aaKnown RBP22.58■■□□□ 1.2
PRKCSH-209ENST00000589838 CFAP45Q9UL16 551 aa22.58■■□□□ 1.2
PRKCSH-209ENST00000589838 MCAMP43121 646 aa22.57■■□□□ 1.2
PRKCSH-209ENST00000589838 RESTQ13127 1097 aa22.57■■□□□ 1.2
PRKCSH-209ENST00000589838 TPRNQ4KMQ1 711 aa22.57■■□□□ 1.2
PRKCSH-209ENST00000589838 EVCP57679 992 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 PUM3Q15397 648 aaKnown RBP22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 PARP10Q53GL7 1025 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 DDX11Q96FC9 970 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 NRAPQ86VF7 1730 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 UBN2Q6ZU65 1347 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 FGAP02671 866 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 ARID4AP29374 1257 aaPredicted RBP22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 MCM5P33992 734 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 ADD2P35612 726 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 TTLL5Q6EMB2 1281 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 LEO1Q8WVC0 666 aaPredicted RBP22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 LPIN2Q92539 896 aa22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 NOL7Q9UMY1 257 aaKnown RBP22.56■■□□□ 1.2
PRKCSH-209ENST00000589838 PTPDC1A2A3K4 754 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 GPAA1O43292 621 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 PDIA3P30101 505 aaKnown RBP22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 ATP6V1AP38606 617 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 UBE3CQ15386 1083 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 ATL3Q6DD88 541 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 INTS5Q6P9B9 1019 aaKnown RBP22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 UTP14AQ9BVJ6 771 aaKnown RBP22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 PUS7LQ9H0K6 701 aaKnown RBP22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 WDR19Q8NEZ3 1342 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 NWD2Q9ULI1 1742 aa22.55■■□□□ 1.2
PRKCSH-209ENST00000589838 ZNF213O14771 459 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 ATRNO75882 1429 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 FAM173BQ6P4H8 233 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 NCOA7Q8NI08 942 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 TFIP11Q9UBB9 837 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 ARAP2Q8WZ64 1704 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 LRP5O75197 1615 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 DHX16O60231 1041 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 CCDC192P0DO97 292 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 GIMAP6Q6P9H5 292 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 RALYLQ86SE5 291 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 FUCA2Q9BTY2 467 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 NUP62CLQ9H1M0 184 aa22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 DDX19AQ9NUU7 478 aaKnown RBP22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 NAP1L2Q9ULW6 460 aaPredicted RBP22.54■■□□□ 1.2
PRKCSH-209ENST00000589838 PHLPP1O60346 1717 aa22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 RREB1Q92766 1687 aa22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 CICQ96RK0 1608 aaPredicted RBP22.53■■□□□ 1.2
PRKCSH-209ENST00000589838 ADAMTS2O95450 1211 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms