RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
DNMT1-220ENST00000589351 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
DNMT1-220ENST00000589351 RRAGCQ9HB90 399 aa7.89□□□□□ -1.15
DNMT1-220ENST00000589351 CCDC7Q96M83 1385 aa7.88□□□□□ -1.15
DNMT1-220ENST00000589351 ZBTB7AO95365 584 aa7.88□□□□□ -1.15
DNMT1-220ENST00000589351 SKIV2LQ15477 1246 aaKnown RBP7.88□□□□□ -1.15
DNMT1-220ENST00000589351 NLRP3Q96P20 1036 aa7.88□□□□□ -1.15
DNMT1-220ENST00000589351 SUV39H2Q9H5I1 410 aa7.88□□□□□ -1.15
DNMT1-220ENST00000589351 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
DNMT1-220ENST00000589351 BCL9O00512 1426 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 RGPD3A6NKT7 1758 aaPredicted RBP7.87□□□□□ -1.15
DNMT1-220ENST00000589351 RGPD4Q7Z3J3 1758 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 SPATA31C2B4DYI2 1134 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 F11P03951 625 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 GRIN2CQ14957 1233 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 PNMA1Q8ND90 353 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 EDARADDQ8WWZ3 215 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.87□□□□□ -1.15
DNMT1-220ENST00000589351 CFHR5Q9BXR6 569 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 MTFR1LQ9H019 292 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 SLIT3O75094 1523 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 SBF2Q86WG5 1849 aa7.87□□□□□ -1.15
DNMT1-220ENST00000589351 CPSF1Q10570 1443 aaKnown RBP7.86□□□□□ -1.15
DNMT1-220ENST00000589351 KTN1Q86UP2 1357 aaKnown RBP7.86□□□□□ -1.15
DNMT1-220ENST00000589351 HOXB4P17483 251 aaPredicted RBP7.86□□□□□ -1.15
DNMT1-220ENST00000589351 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 LINC00114Q6XXX2 140 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 L3MBTL2Q969R5 705 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 SYT17Q9BSW7 474 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 SLC24A3Q9HC58 644 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 NLRP2Q9NX02 1062 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 QRICH2Q9H0J4 1663 aa7.86□□□□□ -1.15
DNMT1-220ENST00000589351 C1QTNF9BB2RNN3 333 aa7.85□□□□□ -1.15
DNMT1-220ENST00000589351 IL2RBP14784 551 aa7.85□□□□□ -1.15
DNMT1-220ENST00000589351 HMGB2P26583 209 aaKnown RBP7.85□□□□□ -1.15
DNMT1-220ENST00000589351 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
DNMT1-220ENST00000589351 CLN3Q13286 438 aa7.85□□□□□ -1.15
DNMT1-220ENST00000589351 CC2D2BQ6DHV5 1058 aa7.85□□□□□ -1.15
DNMT1-220ENST00000589351 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
DNMT1-220ENST00000589351 FHDC1Q9C0D6 1143 aaPredicted RBP7.85□□□□□ -1.15
DNMT1-220ENST00000589351 PEAK1Q9H792 1746 aa7.85□□□□□ -1.15
DNMT1-220ENST00000589351 ROCK2O75116 1388 aaKnown RBP7.84□□□□□ -1.15
DNMT1-220ENST00000589351 AKAP12Q02952 1782 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 USP17L8P0C7I0 530 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 ITGB7P26010 798 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 POLD1P28340 1107 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 NEUROD1Q13562 356 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 PTF1AQ7RTS3 328 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 TAS1R3Q7RTX0 852 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.84□□□□□ -1.15
DNMT1-220ENST00000589351 TMC1Q8TDI8 760 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 ACSBG1Q96GR2 724 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 TERF2IPQ9NYB0 399 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 LRRC37A3O60309 1634 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 TRPM1Q7Z4N2 1603 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 COL18A1P39060 1754 aa7.84□□□□□ -1.15
DNMT1-220ENST00000589351 GPR162Q16538 588 aa7.83□□□□□ -1.16
DNMT1-220ENST00000589351 CD163Q86VB7 1156 aa7.83□□□□□ -1.16
DNMT1-220ENST00000589351 PDGFDQ9GZP0 370 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-220ENST00000589351 GPAMQ9HCL2 828 aa7.83□□□□□ -1.16
DNMT1-220ENST00000589351 GDF2Q9UK05 429 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-220ENST00000589351 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
DNMT1-220ENST00000589351 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
DNMT1-220ENST00000589351 SCTRP47872 440 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 UBAP2LQ14157 1087 aaKnown RBP7.82□□□□□ -1.16
DNMT1-220ENST00000589351 SH3D19Q5HYK7 790 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 TNS2Q63HR2 1409 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 GOLGA6L1Q8N7Z2 621 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 ANKRD24Q8TF21 1146 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 PHF24Q9UPV7 400 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 ABCC6O95255 1503 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 USP31Q70CQ4 1352 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 CASZ1Q86V15 1759 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
DNMT1-220ENST00000589351 C2CD2LO14523 706 aa7.81□□□□□ -1.16
DNMT1-220ENST00000589351 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
DNMT1-220ENST00000589351 SIN3AQ96ST3 1273 aa7.81□□□□□ -1.16
DNMT1-220ENST00000589351 CARD11Q9BXL7 1154 aa7.81□□□□□ -1.16
DNMT1-220ENST00000589351 ARHGEF10LQ9HCE6 1279 aa7.81□□□□□ -1.16
DNMT1-220ENST00000589351 KAT6BQ8WYB5 2073 aa7.81□□□□□ -1.16
DNMT1-220ENST00000589351 WNK3Q9BYP7 1800 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 AMPD1P23109 780 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 CHRNA4P43681 627 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 PHKA2P46019 1235 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 BRPF1P55201 1214 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-220ENST00000589351 C1QTNF8P60827 252 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 CYP2U1Q7Z449 544 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 NME9Q86XW9 330 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 KRTAP1-3Q8IUG1 177 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 IP6K1Q92551 441 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-220ENST00000589351 PUS7Q96PZ0 661 aaKnown RBP7.8□□□□□ -1.16
DNMT1-220ENST00000589351 TRIM34Q9BYJ4 488 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 TFCP2L1Q9NZI6 479 aa7.8□□□□□ -1.16
DNMT1-220ENST00000589351 TRAK2O60296 914 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 GRIN3BO60391 1043 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 AMPHP49418 695 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 COG3Q96JB2 828 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 SEMA6BQ9H3T3 888 aa7.79□□□□□ -1.16
DNMT1-220ENST00000589351 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms