RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 FBXO3Q9UK99 471 aa20.08■□□□□ 0.81
RETREG3-206ENST00000588423 USP17L3A6NCW0 530 aa20.07■□□□□ 0.8
RETREG3-206ENST00000588423 USP17L4A6NCW7 530 aa20.07■□□□□ 0.8
RETREG3-206ENST00000588423 PTPN12Q05209 780 aaKnown RBP20.07■□□□□ 0.8
RETREG3-206ENST00000588423 USP17L1Q7RTZ2 530 aa20.07■□□□□ 0.8
RETREG3-206ENST00000588423 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
RETREG3-206ENST00000588423 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
RETREG3-206ENST00000588423 PLIN1O60240 522 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 KLRK1P26718 216 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 APLP1P51693 650 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 MTX1Q13505 466 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 LRRC24Q50LG9 513 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 RSBN1LQ6PCB5 846 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-206ENST00000588423 AGBL3Q8NEM8 1001 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 PSME4Q14997 1843 aa20.06■□□□□ 0.8
RETREG3-206ENST00000588423 SCN9AQ15858 1988 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 H7C1D1 291 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 SNAP23O00161 211 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 GNAI2P04899 355 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 MICALL2Q8IY33 904 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 VGLL2Q8N8G2 317 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 KLHDC4Q8TBB5 520 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 RCAN3Q9UKA8 241 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 CLEC11AQ9Y240 323 aa20.05■□□□□ 0.8
RETREG3-206ENST00000588423 EYA2O00167 538 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 CIAO1O76071 339 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 PDE8BO95263 885 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 MS4A1P11836 297 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 STRIP1Q5VSL9 837 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 ZNF804AQ7Z570 1209 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 CD209Q9NNX6 404 aa20.04■□□□□ 0.8
RETREG3-206ENST00000588423 RLBP1P12271 317 aa20.03■□□□□ 0.8
RETREG3-206ENST00000588423 IL1R1P14778 569 aa20.03■□□□□ 0.8
RETREG3-206ENST00000588423 GMLQ99445 158 aa20.03■□□□□ 0.8
RETREG3-206ENST00000588423 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.8
RETREG3-206ENST00000588423 DACT2Q5SW24 774 aa20.02■□□□□ 0.8
RETREG3-206ENST00000588423 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
RETREG3-206ENST00000588423 ZC3H15Q8WU90 426 aaKnown RBP20.02■□□□□ 0.8
RETREG3-206ENST00000588423 COPRSQ9NQ92 184 aa20.02■□□□□ 0.8
RETREG3-206ENST00000588423 PGAP2Q9UHJ9 254 aa20.02■□□□□ 0.8
RETREG3-206ENST00000588423 PASKQ96RG2 1323 aa20.02■□□□□ 0.79
RETREG3-206ENST00000588423 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
RETREG3-206ENST00000588423 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
RETREG3-206ENST00000588423 MMP14P50281 582 aa20.01■□□□□ 0.79
RETREG3-206ENST00000588423 TTLL5Q6EMB2 1281 aa20.01■□□□□ 0.79
RETREG3-206ENST00000588423 ATG9AQ7Z3C6 839 aa20.01■□□□□ 0.79
RETREG3-206ENST00000588423 ZNF646O15015 1829 aaPredicted RBP20■□□□□ 0.79
RETREG3-206ENST00000588423 SHTN1A0MZ66 631 aa20■□□□□ 0.79
RETREG3-206ENST00000588423 SRGAP3O43295 1099 aa20■□□□□ 0.79
RETREG3-206ENST00000588423 HIRAP54198 1017 aaPredicted RBP20■□□□□ 0.79
RETREG3-206ENST00000588423 ZNF280AP59817 542 aaPredicted RBP20■□□□□ 0.79
RETREG3-206ENST00000588423 CNTROBQ8N137 903 aa20■□□□□ 0.79
RETREG3-206ENST00000588423 TRPM4Q8TD43 1214 aa20■□□□□ 0.79
RETREG3-206ENST00000588423 FGFR2P21802 821 aa19.99■□□□□ 0.79
RETREG3-206ENST00000588423 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
RETREG3-206ENST00000588423 PUM3Q15397 648 aaKnown RBP19.99■□□□□ 0.79
RETREG3-206ENST00000588423 MAP1SQ66K74 1059 aaPredicted RBP19.99■□□□□ 0.79
RETREG3-206ENST00000588423 FAM84BQ96KN1 310 aaPredicted RBP19.99■□□□□ 0.79
RETREG3-206ENST00000588423 USP17L8P0C7I0 530 aa19.98■□□□□ 0.79
RETREG3-206ENST00000588423 HIBADHP31937 336 aaKnown RBP19.98■□□□□ 0.79
RETREG3-206ENST00000588423 FKBP1AP62942 108 aaKnown RBP19.98■□□□□ 0.79
RETREG3-206ENST00000588423 GTF2IP78347 998 aa19.98■□□□□ 0.79
RETREG3-206ENST00000588423 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
RETREG3-206ENST00000588423 SASH1O94885 1247 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 IFIT1P09914 478 aaKnown RBP19.97■□□□□ 0.79
RETREG3-206ENST00000588423 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 FBXO33Q7Z6M2 555 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 TDRD7Q8NHU6 1098 aaKnown RBP19.97■□□□□ 0.79
RETREG3-206ENST00000588423 PANK1Q8TE04 598 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 LPIN2Q92539 896 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 FBXW7Q969H0 707 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 SIL1Q9H173 461 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 CEP126Q9P2H0 1117 aa19.97■□□□□ 0.79
RETREG3-206ENST00000588423 PA2G4Q9UQ80 394 aaKnown RBP19.97■□□□□ 0.79
RETREG3-206ENST00000588423 GYG1P46976 350 aa19.96■□□□□ 0.79
RETREG3-206ENST00000588423 TBC1D10BQ4KMP7 808 aaPredicted RBP19.96■□□□□ 0.79
RETREG3-206ENST00000588423 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.96■□□□□ 0.79
RETREG3-206ENST00000588423 FAM205AQ6ZU69 1335 aa19.96■□□□□ 0.79
RETREG3-206ENST00000588423 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 EGFRP00533 1210 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 SLC5A1P13866 664 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 MVPQ14764 893 aaKnown RBP19.95■□□□□ 0.78
RETREG3-206ENST00000588423 VPS37DQ86XT2 251 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 OGFOD1Q8N543 542 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 MXD3Q9BW11 206 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 MYOZ2Q9NPC6 264 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 CREBZFQ9NS37 354 aa19.95■□□□□ 0.78
RETREG3-206ENST00000588423 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
RETREG3-206ENST00000588423 POLA2Q14181 598 aa19.94■□□□□ 0.78
RETREG3-206ENST00000588423 PDE3AQ14432 1141 aa19.93■□□□□ 0.78
RETREG3-206ENST00000588423 RBM26Q5T8P6 1007 aaKnown RBP19.93■□□□□ 0.78
RETREG3-206ENST00000588423 CDC37L1Q7L3B6 337 aa19.93■□□□□ 0.78
RETREG3-206ENST00000588423 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
RETREG3-206ENST00000588423 CHMP4BQ9H444 224 aaKnown RBP19.93■□□□□ 0.78
RETREG3-206ENST00000588423 HDAC9Q9UKV0 1011 aa19.93■□□□□ 0.78
RETREG3-206ENST00000588423 DDX19BQ9UMR2 479 aa19.93■□□□□ 0.78
RETREG3-206ENST00000588423 TMEM88BA6NKF7 163 aa19.92■□□□□ 0.78
RETREG3-206ENST00000588423 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms