RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 SNAP23O00161 211 aa17.1■□□□□ 0.33
CHAF1A-204ENST00000587368 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
CHAF1A-204ENST00000587368 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
CHAF1A-204ENST00000587368 SPEF2Q9C093 1822 aa17.1■□□□□ 0.33
CHAF1A-204ENST00000587368 GNAI2P04899 355 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 MS4A1P11836 297 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 KLRK1P26718 216 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 APLP1P51693 650 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 RSBN1LQ6PCB5 846 aaPredicted RBP17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 KLHDC4Q8TBB5 520 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
CHAF1A-204ENST00000587368 EYA2O00167 538 aa17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 CD209Q9NNX6 404 aa17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
CHAF1A-204ENST00000587368 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
CHAF1A-204ENST00000587368 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
CHAF1A-204ENST00000587368 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
CHAF1A-204ENST00000587368 PDE8BO95263 885 aa17.06■□□□□ 0.32
CHAF1A-204ENST00000587368 MTX1Q13505 466 aa17.06■□□□□ 0.32
CHAF1A-204ENST00000587368 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
CHAF1A-204ENST00000587368 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
CHAF1A-204ENST00000587368 FBXW7Q969H0 707 aa17.06■□□□□ 0.32
CHAF1A-204ENST00000587368 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 CIAO1O76071 339 aa17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 RLBP1P12271 317 aa17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 DACT2Q5SW24 774 aa17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 MAP1SQ66K74 1059 aaPredicted RBP17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
CHAF1A-204ENST00000587368 MYO3BQ8WXR4 1341 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 SHTN1A0MZ66 631 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 ITGBL1O95965 494 aaPredicted RBP17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 USP17L8P0C7I0 530 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 IL1R1P14778 569 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 HIBADHP31937 336 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 GTF2IP78347 998 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 GMLQ99445 158 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 SIL1Q9H173 461 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 CEP126Q9P2H0 1117 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 ZNF609O15014 1411 aa17.04■□□□□ 0.32
CHAF1A-204ENST00000587368 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 IFIT1P09914 478 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 IL15P40933 162 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 HIRAP54198 1017 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 CAVIN4Q5BKX8 364 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 FAM84BQ96KN1 310 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 PGAP2Q9UHJ9 254 aa17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-204ENST00000587368 SASH1O94885 1247 aa17.02■□□□□ 0.32
CHAF1A-204ENST00000587368 GYG1P46976 350 aa17.02■□□□□ 0.32
CHAF1A-204ENST00000587368 MMP14P50281 582 aa17.02■□□□□ 0.32
CHAF1A-204ENST00000587368 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.32
CHAF1A-204ENST00000587368 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
CHAF1A-204ENST00000587368 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
CHAF1A-204ENST00000587368 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
CHAF1A-204ENST00000587368 FBXO33Q7Z6M2 555 aa17.01■□□□□ 0.31
CHAF1A-204ENST00000587368 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
CHAF1A-204ENST00000587368 LPIN2Q92539 896 aa17.01■□□□□ 0.31
CHAF1A-204ENST00000587368 MXD3Q9BW11 206 aa17.01■□□□□ 0.31
CHAF1A-204ENST00000587368 SLC5A1P13866 664 aa17■□□□□ 0.31
CHAF1A-204ENST00000587368 FGFR2P21802 821 aa17■□□□□ 0.31
CHAF1A-204ENST00000587368 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
CHAF1A-204ENST00000587368 ADAMTSL1Q8N6G6 1762 aa17■□□□□ 0.31
CHAF1A-204ENST00000587368 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 FRAT2O75474 233 aaPredicted RBP16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 EGFRP00533 1210 aa16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 FKBP1AP62942 108 aaKnown RBP16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
CHAF1A-204ENST00000587368 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 HTRA3P83110 453 aa16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 DCPSQ96C86 337 aaKnown RBP16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
CHAF1A-204ENST00000587368 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms