RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PLIN1O60240 522 aa17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 PDE8BO95263 885 aa17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 RLBP1P12271 317 aa17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 SCNN1DP51172 638 aa17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 STRIP1Q5VSL9 837 aa17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
PRKCSH-202ENST00000585540 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 H7C1D1 291 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 PSMD14O00487 310 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 ZBTB22O15209 634 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 RAD17O75943 681 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 IRS2Q9Y4H2 1338 aa17.17■□□□□ 0.34
PRKCSH-202ENST00000585540 TAF5LO75529 589 aa17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 IL1R1P14778 569 aa17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 GMPSP49915 693 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 LPIN2Q92539 896 aa17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
PRKCSH-202ENST00000585540 LRRC24Q50LG9 513 aa17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 GPR101Q96P66 508 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
PRKCSH-202ENST00000585540 SLC5A1P13866 664 aa17.14■□□□□ 0.33
PRKCSH-202ENST00000585540 HELBQ8NG08 1087 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-202ENST00000585540 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.33
PRKCSH-202ENST00000585540 FGFR2P21802 821 aa17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 HIBADHP31937 336 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 POLA2Q14181 598 aa17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 ATG9AQ7Z3C6 839 aa17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 CNOT7Q9UIV1 285 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-202ENST00000585540 ZNF646O15015 1829 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 HSPA6P17066 643 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 ARAP2Q8WZ64 1704 aa17.12■□□□□ 0.33
PRKCSH-202ENST00000585540 HMMRO75330 724 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 SASH1O94885 1247 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 EPS15P42566 896 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 ZNF280AP59817 542 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 EAPPQ56P03 285 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 OGFOD1Q8N543 542 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
PRKCSH-202ENST00000585540 KLRK1P26718 216 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 APLP1P51693 650 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 FBXO33Q7Z6M2 555 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 GMLQ99445 158 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 SIL1Q9H173 461 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
PRKCSH-202ENST00000585540 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 SEMA3EO15041 775 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 ATP2B3Q16720 1220 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 ZBTB40Q9NUA8 1239 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 PA2G4Q9UQ80 394 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 SUGT1Q9Y2Z0 365 aa17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-202ENST00000585540 GTF2IP78347 998 aa17.08■□□□□ 0.32
PRKCSH-202ENST00000585540 ERC1Q8IUD2 1116 aa17.08■□□□□ 0.32
PRKCSH-202ENST00000585540 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
PRKCSH-202ENST00000585540 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
PRKCSH-202ENST00000585540 WTIPA6NIX2 430 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-202ENST00000585540 AAMPQ13685 434 aa17.07■□□□□ 0.32
PRKCSH-202ENST00000585540 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 301.8 ms