RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
ERBB2-220ENST00000584684 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
ERBB2-220ENST00000584684 KCNJ4P48050 445 aa16.57■□□□□ 0.24
ERBB2-220ENST00000584684 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
ERBB2-220ENST00000584684 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
ERBB2-220ENST00000584684 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
ERBB2-220ENST00000584684 ANKRD44Q8N8A2 993 aa16.57■□□□□ 0.24
ERBB2-220ENST00000584684 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
ERBB2-220ENST00000584684 TRAF5O00463 557 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 EGFRP00533 1210 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 KLRK1P26718 216 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 MMP14P50281 582 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 CDC37L1Q7L3B6 337 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
ERBB2-220ENST00000584684 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-220ENST00000584684 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-220ENST00000584684 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-220ENST00000584684 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
ERBB2-220ENST00000584684 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
ERBB2-220ENST00000584684 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
ERBB2-220ENST00000584684 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
ERBB2-220ENST00000584684 CST9Q5W186 159 aa16.54■□□□□ 0.24
ERBB2-220ENST00000584684 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
ERBB2-220ENST00000584684 MROH5Q6ZUA9 1318 aa16.53■□□□□ 0.24
ERBB2-220ENST00000584684 TAF5LO75529 589 aa16.53■□□□□ 0.24
ERBB2-220ENST00000584684 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
ERBB2-220ENST00000584684 FMR1Q06787 632 aaKnown RBP eCLIP16.53■□□□□ 0.24
ERBB2-220ENST00000584684 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
ERBB2-220ENST00000584684 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
ERBB2-220ENST00000584684 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
ERBB2-220ENST00000584684 PITPNM2Q9BZ72 1349 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 POLR2AP24928 1970 aaKnown RBP16.52■□□□□ 0.24
ERBB2-220ENST00000584684 IL1R1P14778 569 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 UBE4AQ14139 1066 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 CD209Q9NNX6 404 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 MYOZ2Q9NPC6 264 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 GGA3Q9NZ52 723 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 ABT1Q9ULW3 272 aaKnown RBP16.52■□□□□ 0.24
ERBB2-220ENST00000584684 TLL2Q9Y6L7 1015 aa16.52■□□□□ 0.24
ERBB2-220ENST00000584684 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
ERBB2-220ENST00000584684 SNAP23O00161 211 aa16.51■□□□□ 0.23
ERBB2-220ENST00000584684 VEGFBP49765 207 aa16.51■□□□□ 0.23
ERBB2-220ENST00000584684 KRT26Q7Z3Y9 468 aa16.51■□□□□ 0.23
ERBB2-220ENST00000584684 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
ERBB2-220ENST00000584684 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
ERBB2-220ENST00000584684 CELF2O95319 508 aaKnown RBP16.5■□□□□ 0.23
ERBB2-220ENST00000584684 UBTFL1P0CB47 393 aaPredicted RBP16.5■□□□□ 0.23
ERBB2-220ENST00000584684 FKBP1AP62942 108 aaKnown RBP16.5■□□□□ 0.23
ERBB2-220ENST00000584684 DEFB115Q30KQ5 88 aa16.5■□□□□ 0.23
ERBB2-220ENST00000584684 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
ERBB2-220ENST00000584684 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
ERBB2-220ENST00000584684 SAPCD2Q86UD0 394 aa16.5■□□□□ 0.23
ERBB2-220ENST00000584684 OGFOD1Q8N543 542 aa16.5■□□□□ 0.23
ERBB2-220ENST00000584684 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
ERBB2-220ENST00000584684 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
ERBB2-220ENST00000584684 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
ERBB2-220ENST00000584684 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
ERBB2-220ENST00000584684 GTF2IP78347 998 aa16.49■□□□□ 0.23
ERBB2-220ENST00000584684 RBM26Q5T8P6 1007 aaKnown RBP16.49■□□□□ 0.23
ERBB2-220ENST00000584684 USP48Q86UV5 1035 aa16.49■□□□□ 0.23
ERBB2-220ENST00000584684 SULF1Q8IWU6 871 aa16.49■□□□□ 0.23
ERBB2-220ENST00000584684 ECM29Q5VYK3 1845 aa16.49■□□□□ 0.23
ERBB2-220ENST00000584684 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
ERBB2-220ENST00000584684 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
ERBB2-220ENST00000584684 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-220ENST00000584684 SCARF1Q14162 830 aa16.48■□□□□ 0.23
ERBB2-220ENST00000584684 MXD3Q9BW11 206 aa16.48■□□□□ 0.23
ERBB2-220ENST00000584684 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
ERBB2-220ENST00000584684 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-220ENST00000584684 FAM205AQ6ZU69 1335 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
ERBB2-220ENST00000584684 ADM5C9JUS6 153 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 PLIN1O60240 522 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 TRIM27P14373 513 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 ECE1P42892 770 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 ANGEL2Q5VTE6 544 aaKnown RBP16.47■□□□□ 0.23
ERBB2-220ENST00000584684 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
ERBB2-220ENST00000584684 ZBED3Q96IU2 234 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-220ENST00000584684 PAPPA2Q9BXP8 1791 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 SASH1O94885 1247 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 PDE8BO95263 885 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.23
ERBB2-220ENST00000584684 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 CERS5Q8N5B7 392 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 TDRD7Q8NHU6 1098 aaKnown RBP16.46■□□□□ 0.23
ERBB2-220ENST00000584684 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
ERBB2-220ENST00000584684 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
ERBB2-220ENST00000584684 COL1A1P02452 1464 aaPredicted RBP16.46■□□□□ 0.23
ERBB2-220ENST00000584684 EYA2O00167 538 aa16.45■□□□□ 0.22
ERBB2-220ENST00000584684 WNT10BO00744 389 aa16.45■□□□□ 0.22
ERBB2-220ENST00000584684 CIAO1O76071 339 aa16.45■□□□□ 0.22
ERBB2-220ENST00000584684 GNAI3P08754 354 aa16.45■□□□□ 0.22
ERBB2-220ENST00000584684 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms