RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 USP50Q70EL3 339 aaPredicted RBP19.86■□□□□ 0.77
CSNK1D-223ENST00000584472 ZNF804BA4D1E1 1349 aa19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 PNMA6EA0A0J9YXQ4 647 aa19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 RIMBP2O15034 1052 aa19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 SRGAP3O43295 1099 aa19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 HTRA3P83110 453 aa19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 SIRT2Q8IXJ6 389 aa19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 GPR101Q96P66 508 aaPredicted RBP19.85■□□□□ 0.77
CSNK1D-223ENST00000584472 MROH5Q6ZUA9 1318 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 ECE2O60344 883 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 KCNJ4P48050 445 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 RFX5P48382 616 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 CXCL9Q07325 125 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 TNIP1Q15025 636 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 DBNDD1Q9H9R9 158 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 RIPOR2Q9Y4F9 1068 aa19.84■□□□□ 0.77
CSNK1D-223ENST00000584472 WTIPA6NIX2 430 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 YDJCA8MPS7 323 aa19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 POLA2Q14181 598 aa19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 EAPPQ56P03 285 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 SSH3Q8TE77 659 aa19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 PUS3Q9BZE2 481 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 GPRC5DQ9NZD1 345 aa19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 FBXO3Q9UK99 471 aa19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 GJA3Q9Y6H8 435 aa19.83■□□□□ 0.77
CSNK1D-223ENST00000584472 G3V3G9 751 aa19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 PTPN12Q05209 780 aaKnown RBP19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 DOK7Q18PE1 504 aa19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 DCAF8Q5TAQ9 597 aa19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 CIAPIN1Q6FI81 312 aa19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 C15orf52Q6ZUT6 534 aaKnown RBP19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 HELBQ8NG08 1087 aaPredicted RBP19.82■□□□□ 0.76
CSNK1D-223ENST00000584472 PSME4Q14997 1843 aa19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 TAF5LO75529 589 aa19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 RAD17O75943 681 aa19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 CNTROBQ8N137 903 aa19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 KLHDC4Q8TBB5 520 aa19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 ADARB2Q9NS39 739 aaKnown RBP19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 SCN9AQ15858 1988 aa19.81■□□□□ 0.76
CSNK1D-223ENST00000584472 IRS2Q9Y4H2 1338 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 TMEM88BA6NKF7 163 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 EYA2O00167 538 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 HMMRO75330 724 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 CIAO1O76071 339 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 UBE4AQ14139 1066 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 LRRC24Q50LG9 513 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 PODNQ7Z5L7 613 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 COA1Q9GZY4 146 aa19.8■□□□□ 0.76
CSNK1D-223ENST00000584472 ZNF609O15014 1411 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 EPS15P42566 896 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 METTL24Q5JXM2 366 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 TXNRD3Q86VQ6 643 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 VGLL2Q8N8G2 317 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 ZC3H15Q8WU90 426 aaKnown RBP19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 COPRSQ9NQ92 184 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 CLEC11AQ9Y240 323 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 CNTNAP1P78357 1384 aa19.79■□□□□ 0.76
CSNK1D-223ENST00000584472 PDE8BO95263 885 aa19.78■□□□□ 0.76
CSNK1D-223ENST00000584472 KLRK1P26718 216 aa19.78■□□□□ 0.76
CSNK1D-223ENST00000584472 HDAC1Q13547 482 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-223ENST00000584472 DPF2Q92785 391 aa19.78■□□□□ 0.76
CSNK1D-223ENST00000584472 PGAP2Q9UHJ9 254 aa19.78■□□□□ 0.76
CSNK1D-223ENST00000584472 PA2G4Q9UQ80 394 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-223ENST00000584472 SNAP23O00161 211 aa19.77■□□□□ 0.76
CSNK1D-223ENST00000584472 PSMD14O00487 310 aa19.77■□□□□ 0.76
CSNK1D-223ENST00000584472 RPS12P25398 132 aaKnown RBP19.77■□□□□ 0.76
CSNK1D-223ENST00000584472 GMPSP49915 693 aaPredicted RBP19.77■□□□□ 0.76
CSNK1D-223ENST00000584472 ATG9AQ7Z3C6 839 aa19.77■□□□□ 0.76
CSNK1D-223ENST00000584472 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
CSNK1D-223ENST00000584472 MAP1SQ66K74 1059 aaPredicted RBP19.76■□□□□ 0.75
CSNK1D-223ENST00000584472 ZNF804AQ7Z570 1209 aa19.76■□□□□ 0.75
CSNK1D-223ENST00000584472 KCNQ5Q9NR82 932 aa19.76■□□□□ 0.75
CSNK1D-223ENST00000584472 ZNF646O15015 1829 aaPredicted RBP19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 USP17L3A6NCW0 530 aa19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 USP17L4A6NCW7 530 aa19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 IGHDP01880 384 aa19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 IL15P40933 162 aaPredicted RBP19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 PUM3Q15397 648 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 IFFO2Q5TF58 517 aa19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 USP17L1Q7RTZ2 530 aa19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 SIL1Q9H173 461 aa19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 RWDD1Q9H446 243 aaPredicted RBP19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 NOP58Q9Y2X3 529 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-223ENST00000584472 RASSF10A6NK89 507 aa19.74■□□□□ 0.75
CSNK1D-223ENST00000584472 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-223ENST00000584472 DCTPP1Q9H773 170 aa19.74■□□□□ 0.75
CSNK1D-223ENST00000584472 IL1R1P14778 569 aa19.73■□□□□ 0.75
CSNK1D-223ENST00000584472 CD209Q9NNX6 404 aa19.73■□□□□ 0.75
CSNK1D-223ENST00000584472 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
CSNK1D-223ENST00000584472 CEP126Q9P2H0 1117 aa19.73■□□□□ 0.75
CSNK1D-223ENST00000584472 FGFR2P21802 821 aa19.72■□□□□ 0.75
CSNK1D-223ENST00000584472 STRIP1Q5VSL9 837 aa19.72■□□□□ 0.75
CSNK1D-223ENST00000584472 RSBN1LQ6PCB5 846 aaPredicted RBP19.72■□□□□ 0.75
CSNK1D-223ENST00000584472 AGBL3Q8NEM8 1001 aa19.72■□□□□ 0.75
CSNK1D-223ENST00000584472 EXOC6BQ9Y2D4 811 aa19.72■□□□□ 0.75
CSNK1D-223ENST00000584472 H7C1D1 291 aa19.71■□□□□ 0.75
CSNK1D-223ENST00000584472 IFIT1P09914 478 aaKnown RBP19.71■□□□□ 0.75
CSNK1D-223ENST00000584472 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.75
CSNK1D-223ENST00000584472 DACT2Q5SW24 774 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms