RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.52
CDH8-211ENST00000584337 SPATS2Q86XZ4 545 aaKnown RBP11.77□□□□□ -0.52
CDH8-211ENST00000584337 NBPF3Q9H094 633 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 PAX7P23759 505 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 NAP1L1P55209 391 aaKnown RBP11.77□□□□□ -0.52
CDH8-211ENST00000584337 GNGT1P63211 74 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.52
CDH8-211ENST00000584337 CAPS2Q9BXY5 557 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 MBIPQ9NS73 344 aa11.77□□□□□ -0.52
CDH8-211ENST00000584337 TRPM1Q7Z4N2 1603 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 A6NNZ2 444 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 TUBB8Q3ZCM7 444 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 ARMCX5Q6P1M9 558 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
CDH8-211ENST00000584337 EXOC5O00471 708 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 SAMM50Q9Y512 469 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 MRFAP1Q9Y605 127 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 SGSM2O43147 1006 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 OPA1O60313 960 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 ZEB2O60315 1214 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 FAM69CQ0P6D2 419 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 SNCBQ16143 134 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 ERBB3P21860 1342 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 A0A087WWV3 80 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 HNRNPLLQ8WVV9 542 aaKnown RBP11.76□□□□□ -0.53
CDH8-211ENST00000584337 NECTIN2Q92692 538 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 UBXN6Q9BZV1 441 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
CDH8-211ENST00000584337 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
CDH8-211ENST00000584337 BRF1Q92994 677 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 SIL1Q9H173 461 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
CDH8-211ENST00000584337 SETSIPP0DME0 302 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 CPLX2Q6PUV4 134 aaKnown RBP11.75□□□□□ -0.53
CDH8-211ENST00000584337 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
CDH8-211ENST00000584337 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 SAAL1Q96ER3 474 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 RPSAP08865 295 aaKnown RBP11.75□□□□□ -0.53
CDH8-211ENST00000584337 AMPHP49418 695 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 RWDD2BP57060 319 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 ME3Q16798 604 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
CDH8-211ENST00000584337 MAP2K7O14733 419 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 SLC8A1P32418 973 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 ACTN3Q08043 901 aaPredicted RBP11.74□□□□□ -0.53
CDH8-211ENST00000584337 BEND6Q5SZJ8 279 aaPredicted RBP11.74□□□□□ -0.53
CDH8-211ENST00000584337 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
CDH8-211ENST00000584337 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
CDH8-211ENST00000584337 CD248Q9HCU0 757 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 GOLGA6BA6NDN3 693 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 TTC36A6NLP5 189 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 LARGE1O95461 756 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 E2F5Q15329 346 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
CDH8-211ENST00000584337 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 CCDC189A1A4V9 331 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 GPTP24298 496 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 IQCEQ6IPM2 695 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 RBM43Q6ZSC3 357 aaKnown RBP11.73□□□□□ -0.53
CDH8-211ENST00000584337 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 RSRC2Q7L4I2 434 aaKnown RBP11.73□□□□□ -0.53
CDH8-211ENST00000584337 IGSF22Q8N9C0 903 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 WDR24Q96S15 920 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 KLC4Q9NSK0 619 aa11.73□□□□□ -0.53
CDH8-211ENST00000584337 NSD2O96028 1365 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 CUTAO60888 179 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 DHX40Q8IX18 779 aaKnown RBP11.72□□□□□ -0.53
CDH8-211ENST00000584337 PGBD1Q96JS3 809 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 L1RE1Q9UN81 338 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
CDH8-211ENST00000584337 UBTFL1P0CB47 393 aaPredicted RBP11.72□□□□□ -0.53
CDH8-211ENST00000584337 CCDC40Q4G0X9 1142 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 ZNF518AQ6AHZ1 1483 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 MYO1FO00160 1098 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 IRF6O14896 467 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 TRAF1Q13077 416 aa11.72□□□□□ -0.53
CDH8-211ENST00000584337 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
CDH8-211ENST00000584337 CCDC181Q5TID7 509 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms