RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 LTBP1Q14766 1721 aa15.44■□□□□ 0.06
SRSF1-204ENST00000581979 CDHR2Q9BYE9 1310 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 COL4A1P02462 1669 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 PCNTO95613 3336 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 MYH3P11055 1940 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 LMOD1P29536 600 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-204ENST00000581979 CXCL9Q07325 125 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 KLHDC4Q8TBB5 520 aa15.43■□□□□ 0.06
SRSF1-204ENST00000581979 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
SRSF1-204ENST00000581979 RPS8P62241 208 aaKnown RBP15.42■□□□□ 0.06
SRSF1-204ENST00000581979 TTC22Q5TAA0 569 aa15.42■□□□□ 0.06
SRSF1-204ENST00000581979 SIL1Q9H173 461 aa15.42■□□□□ 0.06
SRSF1-204ENST00000581979 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
SRSF1-204ENST00000581979 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
SRSF1-204ENST00000581979 PDE8AO60658 829 aa15.41■□□□□ 0.06
SRSF1-204ENST00000581979 EPS15P42566 896 aa15.41■□□□□ 0.06
SRSF1-204ENST00000581979 PLA2G12BQ9BX93 195 aa15.41■□□□□ 0.06
SRSF1-204ENST00000581979 NSFL1CQ9UNZ2 370 aaKnown RBP15.41■□□□□ 0.06
SRSF1-204ENST00000581979 MX1P20591 662 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 PDE1AP54750 535 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
SRSF1-204ENST00000581979 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 USP50Q70EL3 339 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-204ENST00000581979 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
SRSF1-204ENST00000581979 OSBPL3Q9H4L5 887 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 GPRC5DQ9NZD1 345 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 SALL3Q9BXA9 1300 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 GPSM2P81274 684 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 MAP1SQ66K74 1059 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-204ENST00000581979 CIAPIN1Q6FI81 312 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 POLLQ9UGP5 575 aa15.4■□□□□ 0.06
SRSF1-204ENST00000581979 YDJCA8MPS7 323 aa15.39■□□□□ 0.05
SRSF1-204ENST00000581979 GSPT1P15170 499 aaKnown RBP15.39■□□□□ 0.05
SRSF1-204ENST00000581979 TNIP1Q15025 636 aa15.39■□□□□ 0.05
SRSF1-204ENST00000581979 WASHC4Q2M389 1173 aa15.39■□□□□ 0.05
SRSF1-204ENST00000581979 CCDC57Q2TAC2 916 aa15.39■□□□□ 0.05
SRSF1-204ENST00000581979 PODXL2Q9NZ53 605 aa15.39■□□□□ 0.05
SRSF1-204ENST00000581979 TMEM88BA6NKF7 163 aa15.38■□□□□ 0.05
SRSF1-204ENST00000581979 SASH1O94885 1247 aa15.38■□□□□ 0.05
SRSF1-204ENST00000581979 ADARB2Q9NS39 739 aaKnown RBP15.38■□□□□ 0.05
SRSF1-204ENST00000581979 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 RAD17O75943 681 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 CSF1RP07333 972 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 IFIT2P09913 472 aaKnown RBP15.37■□□□□ 0.05
SRSF1-204ENST00000581979 GMPSP49915 693 aaPredicted RBP15.37■□□□□ 0.05
SRSF1-204ENST00000581979 TBC1D16Q8TBP0 767 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 CCDC85AQ96PX6 553 aaPredicted RBP15.37■□□□□ 0.05
SRSF1-204ENST00000581979 STAP2Q9UGK3 403 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 AOX1Q06278 1338 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 CTSWP56202 376 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 TSHZ3Q63HK5 1081 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 EYA3Q99504 573 aa15.37■□□□□ 0.05
SRSF1-204ENST00000581979 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
SRSF1-204ENST00000581979 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
SRSF1-204ENST00000581979 AACSQ86V21 672 aa15.36■□□□□ 0.05
SRSF1-204ENST00000581979 TTLL11Q8NHH1 800 aa15.36■□□□□ 0.05
SRSF1-204ENST00000581979 RTL9Q8NET4 1388 aa15.35■□□□□ 0.05
SRSF1-204ENST00000581979 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
SRSF1-204ENST00000581979 ANKRD18AQ8IVF6 992 aa15.35■□□□□ 0.05
SRSF1-204ENST00000581979 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
SRSF1-204ENST00000581979 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
SRSF1-204ENST00000581979 DBNDD1Q9H9R9 158 aa15.35■□□□□ 0.05
SRSF1-204ENST00000581979 MKRN1Q9UHC7 482 aaKnown RBP15.35■□□□□ 0.05
SRSF1-204ENST00000581979 ANKRD18BA2A2Z9 1011 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 CDC45O75419 566 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 SEC24BO95487 1268 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 SDSP20132 328 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 IL15P40933 162 aaPredicted RBP15.34■□□□□ 0.05
SRSF1-204ENST00000581979 TFCP2Q12800 502 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 DPF2Q92785 391 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
SRSF1-204ENST00000581979 PGAP2Q9UHJ9 254 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 AK9Q5TCS8 1911 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 EYA2O00167 538 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 CIAO1O76071 339 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 ITGA6P23229 1130 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 CDC5LQ99459 802 aaKnown RBP15.34■□□□□ 0.05
SRSF1-204ENST00000581979 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
SRSF1-204ENST00000581979 GREM2Q9H772 168 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 ANKIB1Q9P2G1 1089 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
SRSF1-204ENST00000581979 PSMD14O00487 310 aa15.33■□□□□ 0.04
SRSF1-204ENST00000581979 ECE2O60344 883 aa15.33■□□□□ 0.04
SRSF1-204ENST00000581979 UFL1O94874 794 aa15.33■□□□□ 0.04
SRSF1-204ENST00000581979 ANP32AP39687 249 aaKnown RBP15.33■□□□□ 0.04
SRSF1-204ENST00000581979 ZC3H15Q8WU90 426 aaKnown RBP15.33■□□□□ 0.04
SRSF1-204ENST00000581979 EAF2Q96CJ1 260 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-204ENST00000581979 CCDC8Q9H0W5 538 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-204ENST00000581979 CNOT7Q9UIV1 285 aaKnown RBP15.33■□□□□ 0.04
SRSF1-204ENST00000581979 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
SRSF1-204ENST00000581979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-204ENST00000581979 RASSF10A6NK89 507 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
SRSF1-204ENST00000581979 ERC2O15083 957 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms