RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
SMCHD1-205ENST00000581383 DLL1O00548 723 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 ZBTB39O15060 712 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 CABP4P57796 275 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 ATCAYQ86WG3 371 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 EDEM1Q92611 657 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 RASSF4Q9H2L5 321 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
SMCHD1-205ENST00000581383 SERPINB4P48594 390 aa8.3□□□□□ -1.08
SMCHD1-205ENST00000581383 PDE12Q6L8Q7 609 aaKnown RBP8.3□□□□□ -1.08
SMCHD1-205ENST00000581383 MEGF10Q96KG7 1140 aa8.3□□□□□ -1.08
SMCHD1-205ENST00000581383 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
SMCHD1-205ENST00000581383 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 PTPRAP18433 802 aa8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 CES1P23141 567 aa8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 SETDB1Q15047 1291 aa8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 COL13A1Q5TAT6 717 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 TMCO4Q5TGY1 634 aa8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 AGGF1Q8N302 714 aaeCLIP8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 CCDC9Q9Y3X0 531 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-205ENST00000581383 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 ABL1P00519 1130 aa8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 ACAD11Q709F0 780 aa8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 HELQQ8TDG4 1101 aa8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 PBX4Q9BYU1 374 aa8.28□□□□□ -1.08
SMCHD1-205ENST00000581383 DUOXA2Q1HG44 320 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 LCE1DQ5T752 114 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 ALKBH2Q6NS38 261 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 PRR23CQ6ZRP0 262 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 ILDR2Q71H61 639 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 TMEM130Q8N3G9 435 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 CEP41Q9BYV8 373 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.09
SMCHD1-205ENST00000581383 SART1O43290 800 aaKnown RBP8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 ARL4DP49703 201 aa8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 SND1Q7KZF4 910 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 GTF3C2Q8WUA4 911 aaPredicted RBP8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 PMEPA1Q969W9 287 aa8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
SMCHD1-205ENST00000581383 FSCN2O14926 492 aa8.25□□□□□ -1.09
SMCHD1-205ENST00000581383 MPSTP25325 297 aa8.25□□□□□ -1.09
SMCHD1-205ENST00000581383 LRP8Q14114 963 aa8.25□□□□□ -1.09
SMCHD1-205ENST00000581383 KLHL23Q8NBE8 558 aa8.25□□□□□ -1.09
SMCHD1-205ENST00000581383 SLC7A3Q8WY07 619 aa8.25□□□□□ -1.09
SMCHD1-205ENST00000581383 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
SMCHD1-205ENST00000581383 SOWAHDA6NJG2 315 aa8.24□□□□□ -1.09
SMCHD1-205ENST00000581383 DHX15O43143 795 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-205ENST00000581383 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-205ENST00000581383 ZNF211Q13398 564 aaPredicted RBP8.24□□□□□ -1.09
SMCHD1-205ENST00000581383 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
SMCHD1-205ENST00000581383 STOML1Q9UBI4 398 aa8.24□□□□□ -1.09
SMCHD1-205ENST00000581383 KIF4AO95239 1232 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 PDGFAP04085 211 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 FSTP19883 344 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 MTMR3Q13615 1198 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 GALNT11Q8NCW6 608 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 PCMTD2Q9NV79 361 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
SMCHD1-205ENST00000581383 A6NHS1 94 aa8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 PHACTR2O75167 634 aa8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 FAM13AO94988 1023 aa8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 EPHA1P21709 976 aa8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 DZIP1LQ8IYY4 767 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 CEP120Q8N960 986 aa8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 UTP4Q969X6 686 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 POP1Q99575 1024 aaKnown RBP8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 RAXQ9Y2V3 346 aa8.22□□□□□ -1.09
SMCHD1-205ENST00000581383 H3BRB1 525 aa8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 GSC2O15499 205 aa8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 HYAL3O43820 417 aaPredicted RBP8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 GGNBP2Q9H3C7 697 aa8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 TUT1Q9H6E5 874 aaKnown RBP8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 BIN2Q9UBW5 565 aaPredicted RBP8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 EGFL7Q9UHF1 273 aa8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 POLIQ9UNA4 740 aa8.21□□□□□ -1.1
SMCHD1-205ENST00000581383 H3BRJ5 948 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 ICMTO60725 284 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 COBLO75128 1261 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 USP5P45974 858 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 NLRP12P59046 1061 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 EHHADHQ08426 723 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 CCDC27Q2M243 656 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 GLYCTKQ8IVS8 523 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 ASAP3Q8TDY4 903 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 RNF112Q9ULX5 631 aa8.2□□□□□ -1.1
SMCHD1-205ENST00000581383 DDX3YO15523 660 aaKnown RBP8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 TRPA1O75762 1119 aa8.19□□□□□ -1.1
SMCHD1-205ENST00000581383 WISP1O95388 367 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms