RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 SMC4Q9NTJ3 1288 aa21.41■■□□□ 1.02
CDC42EP4-206ENST00000581014 IRS2Q9Y4H2 1338 aa21.4■■□□□ 1.02
CDC42EP4-206ENST00000581014 TRAF5O00463 557 aa21.4■■□□□ 1.02
CDC42EP4-206ENST00000581014 STRIP1Q5VSL9 837 aa21.4■■□□□ 1.02
CDC42EP4-206ENST00000581014 CHMP3Q9Y3E7 222 aa21.4■■□□□ 1.02
CDC42EP4-206ENST00000581014 EGFRP00533 1210 aa21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 MMP14P50281 582 aa21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 TBC1D10BQ4KMP7 808 aaPredicted RBP21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 DACT2Q5SW24 774 aa21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 LDHAL6AQ6ZMR3 332 aa21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 MIER1Q8N108 512 aa21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 GLIS2Q9BZE0 524 aaPredicted RBP21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 USP44Q9H0E7 712 aa21.39■■□□□ 1.01
CDC42EP4-206ENST00000581014 POLR2AP24928 1970 aaKnown RBP21.38■■□□□ 1.01
CDC42EP4-206ENST00000581014 USP17L8P0C7I0 530 aa21.38■■□□□ 1.01
CDC42EP4-206ENST00000581014 VEGFBP49765 207 aa21.38■■□□□ 1.01
CDC42EP4-206ENST00000581014 FMR1Q06787 632 aaKnown RBP eCLIP21.38■■□□□ 1.01
CDC42EP4-206ENST00000581014 DEFB115Q30KQ5 88 aa21.38■■□□□ 1.01
CDC42EP4-206ENST00000581014 MYO3BQ8WXR4 1341 aa21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 KLRK1P26718 216 aa21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 KCNJ4P48050 445 aa21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 KIF4BQ2VIQ3 1234 aa21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 ZNF594Q96JF6 807 aaPredicted RBP21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 BICC1Q9H694 974 aaKnown RBP21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 ABT1Q9ULW3 272 aaKnown RBP21.37■■□□□ 1.01
CDC42EP4-206ENST00000581014 TAF5LO75529 589 aa21.36■■□□□ 1.01
CDC42EP4-206ENST00000581014 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
CDC42EP4-206ENST00000581014 TAF7LQ5H9L4 462 aa21.36■■□□□ 1.01
CDC42EP4-206ENST00000581014 ANKRD44Q8N8A2 993 aa21.36■■□□□ 1.01
CDC42EP4-206ENST00000581014 TLL2Q9Y6L7 1015 aa21.36■■□□□ 1.01
CDC42EP4-206ENST00000581014 RBM26Q5T8P6 1007 aaKnown RBP21.35■■□□□ 1.01
CDC42EP4-206ENST00000581014 TNS4Q8IZW8 715 aa21.35■■□□□ 1.01
CDC42EP4-206ENST00000581014 HELBQ8NG08 1087 aaPredicted RBP21.35■■□□□ 1.01
CDC42EP4-206ENST00000581014 HHIPL1Q96JK4 782 aa21.35■■□□□ 1.01
CDC42EP4-206ENST00000581014 CD209Q9NNX6 404 aa21.35■■□□□ 1.01
CDC42EP4-206ENST00000581014 CNNM1Q9NRU3 951 aa21.35■■□□□ 1.01
CDC42EP4-206ENST00000581014 SNAP23O00161 211 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 CELF2O95319 508 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 TTLL5Q6EMB2 1281 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 KRT26Q7Z3Y9 468 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 USP48Q86UV5 1035 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 ARHGAP45Q92619 1136 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 MYOZ2Q9NPC6 264 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 NOB1Q9ULX3 412 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 RIPOR2Q9Y4F9 1068 aa21.34■■□□□ 1.01
CDC42EP4-206ENST00000581014 IL1R1P14778 569 aa21.33■■□□□ 1.01
CDC42EP4-206ENST00000581014 SAPCD2Q86UD0 394 aa21.33■■□□□ 1.01
CDC42EP4-206ENST00000581014 UBE4AQ14139 1066 aa21.32■■□□□ 1
CDC42EP4-206ENST00000581014 SCARF1Q14162 830 aa21.32■■□□□ 1
CDC42EP4-206ENST00000581014 OGFOD1Q8N543 542 aa21.32■■□□□ 1
CDC42EP4-206ENST00000581014 ZNF646O15015 1829 aaPredicted RBP21.32■■□□□ 1
CDC42EP4-206ENST00000581014 MROH5Q6ZUA9 1318 aa21.31■■□□□ 1
CDC42EP4-206ENST00000581014 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
CDC42EP4-206ENST00000581014 A0A1B0GUL6 1792 aa21.31■■□□□ 1
CDC42EP4-206ENST00000581014 FOXN1O15353 648 aa21.31■■□□□ 1
CDC42EP4-206ENST00000581014 ZNF804AQ7Z570 1209 aa21.31■■□□□ 1
CDC42EP4-206ENST00000581014 AIDAQ96BJ3 306 aa21.31■■□□□ 1
CDC42EP4-206ENST00000581014 PUS3Q9BZE2 481 aaKnown RBP21.31■■□□□ 1
CDC42EP4-206ENST00000581014 GGA3Q9NZ52 723 aa21.31■■□□□ 1
CDC42EP4-206ENST00000581014 KIF16BQ96L93 1317 aa21.3■■□□□ 1
CDC42EP4-206ENST00000581014 PITPNM2Q9BZ72 1349 aa21.3■■□□□ 1
CDC42EP4-206ENST00000581014 ECE1P42892 770 aa21.3■■□□□ 1
CDC42EP4-206ENST00000581014 FKBP1AP62942 108 aaKnown RBP21.3■■□□□ 1
CDC42EP4-206ENST00000581014 GTF2IP78347 998 aa21.3■■□□□ 1
CDC42EP4-206ENST00000581014 PAXIP1Q6ZW49 1069 aaPredicted RBP21.3■■□□□ 1
CDC42EP4-206ENST00000581014 SULF1Q8IWU6 871 aa21.3■■□□□ 1
CDC42EP4-206ENST00000581014 MXD3Q9BW11 206 aa21.3■■□□□ 1
CDC42EP4-206ENST00000581014 WBP1LQ9NX94 342 aa21.29■■□□□ 1
CDC42EP4-206ENST00000581014 ASTN2O75129 1339 aaPredicted RBP21.29■■□□□ 1
CDC42EP4-206ENST00000581014 CAPN15O75808 1086 aa21.28■■□□□ 1
CDC42EP4-206ENST00000581014 SASH1O94885 1247 aa21.28■■□□□ 1
CDC42EP4-206ENST00000581014 ANGEL2Q5VTE6 544 aaKnown RBP21.28■■□□□ 1
CDC42EP4-206ENST00000581014 CAPNS2Q96L46 248 aa21.28■■□□□ 1
CDC42EP4-206ENST00000581014 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
CDC42EP4-206ENST00000581014 ADM5C9JUS6 153 aa21.27■■□□□ 1
CDC42EP4-206ENST00000581014 PLIN1O60240 522 aa21.27■■□□□ 1
CDC42EP4-206ENST00000581014 RFX5P48382 616 aaPredicted RBP21.27■■□□□ 1
CDC42EP4-206ENST00000581014 GRM1Q13255 1194 aa21.27■■□□□ 1
CDC42EP4-206ENST00000581014 INTS3Q68E01 1043 aaKnown RBP21.27■■□□□ 1
CDC42EP4-206ENST00000581014 ZBED3Q96IU2 234 aaPredicted RBP21.27■■□□□ 1
CDC42EP4-206ENST00000581014 WNT10BO00744 389 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 UBTFL1P0CB47 393 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 MAP2K2P36507 400 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 MAP2K1Q02750 393 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 DLK2Q6UY11 383 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 CERS5Q8N5B7 392 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 VGLL2Q8N8G2 317 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 TDRD7Q8NHU6 1098 aaKnown RBP21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 FBXW7Q969H0 707 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 FAM84BQ96KN1 310 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 ZNF408Q9H9D4 720 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 HDAC9Q9UKV0 1011 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 FAM205AQ6ZU69 1335 aa21.26■□□□□ 0.99
CDC42EP4-206ENST00000581014 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
CDC42EP4-206ENST00000581014 PDE8BO95263 885 aa21.25■□□□□ 0.99
CDC42EP4-206ENST00000581014 CTCFP49711 727 aaPredicted RBP21.25■□□□□ 0.99
CDC42EP4-206ENST00000581014 HNRNPUQ00839 825 aaKnown RBP eCLIP21.25■□□□□ 0.99
CDC42EP4-206ENST00000581014 NBPF9Q3BBW0 867 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms