RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 ZBTB38Q8NAP3 1195 aaPredicted RBP21.84■■□□□ 1.09
EIF4A1-216ENST00000580888 UPF2Q9HAU5 1272 aaKnown RBP21.84■■□□□ 1.09
EIF4A1-216ENST00000580888 CWC25Q9NXE8 425 aaPredicted RBP21.84■■□□□ 1.09
EIF4A1-216ENST00000580888 ZNRF3Q9ULT6 936 aa21.84■■□□□ 1.09
EIF4A1-216ENST00000580888 GJA3Q9Y6H8 435 aa21.84■■□□□ 1.09
EIF4A1-216ENST00000580888 TRPM7Q96QT4 1865 aa21.83■■□□□ 1.09
EIF4A1-216ENST00000580888 IRS4O14654 1257 aaPredicted RBP21.83■■□□□ 1.09
EIF4A1-216ENST00000580888 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
EIF4A1-216ENST00000580888 TBC1D9Q6ZT07 1266 aa21.83■■□□□ 1.09
EIF4A1-216ENST00000580888 ERC1Q8IUD2 1116 aa21.83■■□□□ 1.09
EIF4A1-216ENST00000580888 HSP90B1P14625 803 aaKnown RBP21.82■■□□□ 1.08
EIF4A1-216ENST00000580888 SDSP20132 328 aa21.82■■□□□ 1.08
EIF4A1-216ENST00000580888 MX1P20591 662 aa21.82■■□□□ 1.08
EIF4A1-216ENST00000580888 LMOD1P29536 600 aaPredicted RBP21.82■■□□□ 1.08
EIF4A1-216ENST00000580888 COPRSQ9NQ92 184 aa21.82■■□□□ 1.08
EIF4A1-216ENST00000580888 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
EIF4A1-216ENST00000580888 CELF1Q92879 486 aaKnown RBP21.81■■□□□ 1.08
EIF4A1-216ENST00000580888 FOXO4P98177 505 aa21.8■■□□□ 1.08
EIF4A1-216ENST00000580888 CXCL9Q07325 125 aa21.8■■□□□ 1.08
EIF4A1-216ENST00000580888 USP50Q70EL3 339 aaPredicted RBP21.8■■□□□ 1.08
EIF4A1-216ENST00000580888 UBE3BQ7Z3V4 1068 aa21.8■■□□□ 1.08
EIF4A1-216ENST00000580888 CLEC11AQ9Y240 323 aa21.8■■□□□ 1.08
EIF4A1-216ENST00000580888 CDHR2Q9BYE9 1310 aa21.8■■□□□ 1.08
EIF4A1-216ENST00000580888 CNTNAP1P78357 1384 aa21.79■■□□□ 1.08
EIF4A1-216ENST00000580888 EPS15P42566 896 aa21.79■■□□□ 1.08
EIF4A1-216ENST00000580888 RBM25P49756 843 aaKnown RBP21.79■■□□□ 1.08
EIF4A1-216ENST00000580888 CNTROBQ8N137 903 aa21.79■■□□□ 1.08
EIF4A1-216ENST00000580888 GPRC5DQ9NZD1 345 aa21.79■■□□□ 1.08
EIF4A1-216ENST00000580888 TMEM88BA6NKF7 163 aa21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 SASH1O94885 1247 aa21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 RTL5Q5HYW3 569 aaPredicted RBP21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 PLA2G12BQ9BX93 195 aa21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 C22orf23Q9BZE7 217 aa21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 IL1RAPL2Q9NP60 686 aa21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
EIF4A1-216ENST00000580888 RPS8P62241 208 aaKnown RBP21.77■■□□□ 1.08
EIF4A1-216ENST00000580888 MAP1SQ66K74 1059 aaPredicted RBP21.77■■□□□ 1.08
EIF4A1-216ENST00000580888 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.08
EIF4A1-216ENST00000580888 TTC41PQ6P2S7 1318 aa21.77■■□□□ 1.07
EIF4A1-216ENST00000580888 PSME4Q14997 1843 aa21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 PDE8AO60658 829 aa21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 MFAP1P55081 439 aaKnown RBP21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 PTPN12Q05209 780 aaKnown RBP21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 TNIP1Q15025 636 aa21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 PI4K2BQ8TCG2 481 aa21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 ADARB2Q9NS39 739 aaKnown RBP21.76■■□□□ 1.07
EIF4A1-216ENST00000580888 YDJCA8MPS7 323 aa21.75■■□□□ 1.07
EIF4A1-216ENST00000580888 G3BP1Q13283 466 aaKnown RBP eCLIP21.75■■□□□ 1.077e-10■■■□□ 16.7
EIF4A1-216ENST00000580888 PODXL2Q9NZ53 605 aa21.75■■□□□ 1.07
EIF4A1-216ENST00000580888 MKRN1Q9UHC7 482 aaKnown RBP21.75■■□□□ 1.07
EIF4A1-216ENST00000580888 NSFL1CQ9UNZ2 370 aaKnown RBP21.75■■□□□ 1.07
EIF4A1-216ENST00000580888 SCN9AQ15858 1988 aa21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 GMPSP49915 693 aaPredicted RBP21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 GPSM2P81274 684 aa21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 WASHC4Q2M389 1173 aa21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 CCDC152Q4G0S7 254 aa21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 CLASRPQ8N2M8 674 aaKnown RBP21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 JARID2Q92833 1246 aaPredicted RBP21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 POLLQ9UGP5 575 aa21.74■■□□□ 1.07
EIF4A1-216ENST00000580888 HSPA1AP0DMV8 641 aaKnown RBP21.73■■□□□ 1.07
EIF4A1-216ENST00000580888 HSPA1BP0DMV9 641 aaKnown RBP21.73■■□□□ 1.07
EIF4A1-216ENST00000580888 SEC31BQ9NQW1 1179 aa21.73■■□□□ 1.07
EIF4A1-216ENST00000580888 SPEF2Q9C093 1822 aa21.73■■□□□ 1.07
EIF4A1-216ENST00000580888 OS9Q13438 667 aaPredicted RBP21.72■■□□□ 1.07
EIF4A1-216ENST00000580888 LMBR1LQ6UX01 489 aa21.72■■□□□ 1.07
EIF4A1-216ENST00000580888 TBC1D16Q8TBP0 767 aa21.72■■□□□ 1.07
EIF4A1-216ENST00000580888 EYA3Q99504 573 aa21.72■■□□□ 1.07
EIF4A1-216ENST00000580888 PGAP2Q9UHJ9 254 aa21.72■■□□□ 1.07
EIF4A1-216ENST00000580888 RASSF10A6NK89 507 aa21.71■■□□□ 1.07
EIF4A1-216ENST00000580888 RAD17O75943 681 aa21.71■■□□□ 1.07
EIF4A1-216ENST00000580888 CSF1RP07333 972 aa21.7■■□□□ 1.06
EIF4A1-216ENST00000580888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.7■■□□□ 1.06
EIF4A1-216ENST00000580888 RTL9Q8NET4 1388 aa21.7■■□□□ 1.06
EIF4A1-216ENST00000580888 THSD7BQ9C0I4 1608 aa21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 POLR2AP24928 1970 aaKnown RBP21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 C6orf229H3BNL8 230 aa21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 TSHZ3Q63HK5 1081 aa21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 CASC1Q6TDU7 716 aa21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 ZC3H15Q8WU90 426 aaKnown RBP21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 DPF2Q92785 391 aa21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 EAF2Q96CJ1 260 aaPredicted RBP21.69■■□□□ 1.06
EIF4A1-216ENST00000580888 GLRX3O76003 335 aaKnown RBP21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 VEGFBP49765 207 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 CTSWP56202 376 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 KLHDC4Q8TBB5 520 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 USP26Q9BXU7 913 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 DBNDD1Q9H9R9 158 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 ECHDC1Q9NTX5 307 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 FBXO3Q9UK99 471 aa21.68■■□□□ 1.06
EIF4A1-216ENST00000580888 ZNF609O15014 1411 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 PSMD14O00487 310 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 RIMBP2O15034 1052 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 ECE2O60344 883 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 CHMLP26374 656 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 COL13A1Q5TAT6 717 aaPredicted RBP21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 KIF2CQ99661 725 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 GPR108Q9NPR9 543 aa21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 CNOT7Q9UIV1 285 aaKnown RBP21.67■■□□□ 1.06
EIF4A1-216ENST00000580888 ERC2O15083 957 aa21.66■■□□□ 1.06
EIF4A1-216ENST00000580888 EPB41L2O43491 1005 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms