RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 ZMYND8Q9ULU4 1186 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-211ENST00000578875 ZSWIM8A7E2V4 1837 aa10.65□□□□□ -0.71
PPP4R1-211ENST00000578875 VCANP13611 3396 aa10.65□□□□□ -0.71
PPP4R1-211ENST00000578875 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 GJB1P08034 283 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 CCL5P13501 91 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 PRKAR2BP31323 418 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 BMP8BP34820 402 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 PLA2G5P39877 138 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 TAF1CQ15572 869 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 MAP3K11Q16584 847 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 LRIT3Q3SXY7 679 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 TMC4Q7Z404 712 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 LRP10Q7Z4F1 713 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 RNF208Q9H0X6 261 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 LAMB2P55268 1798 aa10.64□□□□□ -0.71
PPP4R1-211ENST00000578875 RPTORQ8N122 1335 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 USP2O75604 605 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 UFL1O94874 794 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 FARP2O94887 1054 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 SYN1P17600 705 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 RPS8P62241 208 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 PDIA6Q15084 440 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 TAF7Q15545 349 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 U2AF1L4Q8WU68 220 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 BRI3BPQ8WY22 251 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 DEFB129Q9H1M3 183 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 PCDHAC2Q9Y5I4 1007 aa10.63□□□□□ -0.71
PPP4R1-211ENST00000578875 SH3TC1Q8TE82 1336 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 TTC28Q96AY4 2481 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 ARHGEF6Q15052 776 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 FAM122AQ96E09 287 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 FAM89AQ96GI7 184 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 ELP3Q9H9T3 547 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 ZFYVE28Q9HCC9 887 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 SEC31BQ9NQW1 1179 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 KNSTRNQ9Y448 316 aa10.62□□□□□ -0.71
PPP4R1-211ENST00000578875 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 HOXD11P31277 338 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 LACTBP83111 547 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 AIMP1Q12904 312 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 SF3B3Q15393 1217 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 DACT2Q5SW24 774 aa10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 NBPF12Q5TAG4 269 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 ANKIB1Q9P2G1 1089 aa10.61□□□□□ -0.71
PPP4R1-211ENST00000578875 SSC5DA1L4H1 1573 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 IRS2Q9Y4H2 1338 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 SPTBN5Q9NRC6 3674 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 SGPL1O95470 568 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 GRK4P32298 578 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 MAGEA10P43363 369 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 C7orf61Q8IZ16 206 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 FBXW7Q969H0 707 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 OPTNQ96CV9 577 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 ZBED3Q96IU2 234 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 BIN2Q9UBW5 565 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 GGA1Q9UJY5 639 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 RIPOR2Q9Y4F9 1068 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 LRRC37AA6NMS7 1700 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 LAMB4A4D0S4 1761 aa10.6□□□□□ -0.71
PPP4R1-211ENST00000578875 AOX1Q06278 1338 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 CCL15-CCL14A0A0B4J2E2 113 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 PPP1R12BO60237 982 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 EIF2S2P20042 333 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 CCL15Q16663 113 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 COPS6Q7L5N1 327 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 TDHQ8IZJ6 230 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 SRRDQ9UH36 339 aa10.59□□□□□ -0.71
PPP4R1-211ENST00000578875 TLR2O60603 784 aa10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 TFRCP02786 760 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 OSBPP22059 807 aa10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 PSMC4P43686 418 aa10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 KIF22Q14807 665 aa10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 APOBEC3FQ8IUX4 373 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-211ENST00000578875 TMEM265A0A087WTH1 108 aa10.57□□□□□ -0.72
PPP4R1-211ENST00000578875 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
PPP4R1-211ENST00000578875 RAET1EQ8TD07 263 aa10.57□□□□□ -0.72
PPP4R1-211ENST00000578875 XAGE3Q8WTP9 111 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms