RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
CDK5RAP3-203ENST00000577442 C16orf71Q8IYS4 520 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-203ENST00000577442 CEP126Q9P2H0 1117 aa15.78■□□□□ 0.12
CDK5RAP3-203ENST00000577442 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-203ENST00000577442 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 ATG9AQ7Z3C6 839 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 VGLL2Q8N8G2 317 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 SSH3Q8TE77 659 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 RRAGCQ9HB90 399 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 ZBTB40Q9NUA8 1239 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 HACL1Q9UJ83 578 aa15.77■□□□□ 0.12
CDK5RAP3-203ENST00000577442 WTIPA6NIX2 430 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 KIF3CO14782 793 aa15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 HMMRO75330 724 aa15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 IFIT1P09914 478 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 SLC5A1P13866 664 aa15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 KLRK1P26718 216 aa15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 G3BP1Q13283 466 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 POLA2Q14181 598 aa15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 CEP85Q6P2H3 762 aa15.76■□□□□ 0.11
CDK5RAP3-203ENST00000577442 IRS2Q9Y4H2 1338 aa15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 SNAP23O00161 211 aa15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 PSMD14O00487 310 aa15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 RPS12P25398 132 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 TXNRD3Q86VQ6 643 aa15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 RPAP2Q8IXW5 612 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 LPIN2Q92539 896 aa15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 ZNF609O15014 1411 aa15.75■□□□□ 0.11
CDK5RAP3-203ENST00000577442 USP17L3A6NCW0 530 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 USP17L4A6NCW7 530 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 GMPSP49915 693 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 OS9Q13438 667 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 ATP2B3Q16720 1220 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 CAVIN4Q5BKX8 364 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 USP17L1Q7RTZ2 530 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 VPS37DQ86XT2 251 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 CD209Q9NNX6 404 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 AKAP2Q9Y2D5 859 aa15.74■□□□□ 0.11
CDK5RAP3-203ENST00000577442 MYO3BQ8WXR4 1341 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 TOMM70O94826 608 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 VIL1P09327 827 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 FGFR2P21802 821 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 HIBADHP31937 336 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 SCNN1DP51172 638 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 STRIP1Q5VSL9 837 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 DPF2Q92785 391 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 TAF1DQ9H5J8 278 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 GPRC5DQ9NZD1 345 aa15.73■□□□□ 0.11
CDK5RAP3-203ENST00000577442 ARAP2Q8WZ64 1704 aa15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 POTECB2RU33 542 aa15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 IL1R1P14778 569 aa15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 EPHX2P34913 555 aa15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 RSBN1LQ6PCB5 846 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 PNMA8AQ86V59 439 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 AGBL3Q8NEM8 1001 aa15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
CDK5RAP3-203ENST00000577442 MYH13Q9UKX3 1938 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 H7C1D1 291 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 GYG1P46976 350 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 FBXO33Q7Z6M2 555 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 ERC1Q8IUD2 1116 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 FAM84BQ96KN1 310 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 KCNQ5Q9NR82 932 aa15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 ADARB2Q9NS39 739 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-203ENST00000577442 TFCP2Q12800 502 aa15.7■□□□□ 0.1
CDK5RAP3-203ENST00000577442 DACT2Q5SW24 774 aa15.7■□□□□ 0.1
CDK5RAP3-203ENST00000577442 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
CDK5RAP3-203ENST00000577442 ZNF646O15015 1829 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-203ENST00000577442 FRAT2O75474 233 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 EPS15P42566 896 aa15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 MMP14P50281 582 aa15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 GTF2IP78347 998 aa15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 EAPPQ56P03 285 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 USP50Q70EL3 339 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 LDHDQ86WU2 507 aa15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 SMC1BQ8NDV3 1235 aa15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 TDRD7Q8NHU6 1098 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 GNL3LQ9NVN8 582 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 CNOT7Q9UIV1 285 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-203ENST00000577442 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 A0A1B0GUL7 405 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 SASH1O94885 1247 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 FSTL1Q12841 308 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 AAMPQ13685 434 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 CRBNQ96SW2 442 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 GPR108Q9NPR9 543 aa15.68■□□□□ 0.1
CDK5RAP3-203ENST00000577442 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
CDK5RAP3-203ENST00000577442 BCAMP50895 628 aa15.67■□□□□ 0.1
CDK5RAP3-203ENST00000577442 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
CDK5RAP3-203ENST00000577442 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
CDK5RAP3-203ENST00000577442 GMLQ99445 158 aa15.67■□□□□ 0.1
CDK5RAP3-203ENST00000577442 ADAMTSL1Q8N6G6 1762 aa15.67■□□□□ 0.1
CDK5RAP3-203ENST00000577442 SEMA3EO15041 775 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms