RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MYD88Q99836 296 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 STK31Q9BXU1 1019 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
NPLOC4-219ENST00000576713 F6X3S4 739 aa12.12□□□□□ -0.47
NPLOC4-219ENST00000576713 TGFB2P61812 414 aa12.12□□□□□ -0.47
NPLOC4-219ENST00000576713 GPR162Q16538 588 aa12.12□□□□□ -0.47
NPLOC4-219ENST00000576713 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
NPLOC4-219ENST00000576713 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-219ENST00000576713 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-219ENST00000576713 SLC10A3P09131 477 aa12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 CWF19L2Q2TBE0 894 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 C2CD5Q86YS7 1000 aa12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 BRIP1Q9BX63 1249 aa12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-219ENST00000576713 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 SLF2Q8IX21 1173 aa12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 LAMB2P55268 1798 aa12.1□□□□□ -0.47
NPLOC4-219ENST00000576713 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 ST5P78524 1137 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 FAM89AQ96GI7 184 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
NPLOC4-219ENST00000576713 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
NPLOC4-219ENST00000576713 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-219ENST00000576713 SRGNP10124 158 aa12.08□□□□□ -0.48
NPLOC4-219ENST00000576713 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
NPLOC4-219ENST00000576713 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-219ENST00000576713 H0YIN7 160 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 NPHP1O15259 732 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 BCAR3O75815 825 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 PDE6BP35913 854 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 DNAAF4Q8WXU2 420 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 CHMP4AQ9BY43 222 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 SMC4Q9NTJ3 1288 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
NPLOC4-219ENST00000576713 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 CASP7P55210 303 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 BEND3Q5T5X7 828 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 SLX4Q8IY92 1834 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 SH3TC1Q8TE82 1336 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
NPLOC4-219ENST00000576713 RNF40O75150 1001 aa12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 CT47B1P0C2W7 299 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 GCGRP47871 477 aa12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 PRELPP51888 382 aa12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 SPIRE2Q8WWL2 714 aa12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 ZNF622Q969S3 477 aaKnown RBP eCLIP12.05□□□□□ -0.484e-14■□□□□ 10.9
NPLOC4-219ENST00000576713 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 CWC25Q9NXE8 425 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 NOB1Q9ULX3 412 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-219ENST00000576713 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 PCCAP05165 728 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 GCKRQ14397 625 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 DIXDC1Q155Q3 683 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 PRPF40BQ6NWY9 871 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 ZBTB38Q8NAP3 1195 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 WNT2BQ93097 391 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 CACNA1FO60840 1977 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 RNF123Q5XPI4 1314 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 TAF1P21675 1872 aa12.04□□□□□ -0.48
NPLOC4-219ENST00000576713 H7C1W4 665 aa12.03□□□□□ -0.48
NPLOC4-219ENST00000576713 NPR1P16066 1061 aa12.03□□□□□ -0.48
NPLOC4-219ENST00000576713 SLC4A10Q6U841 1118 aa12.03□□□□□ -0.48
NPLOC4-219ENST00000576713 TTLL6Q8N841 843 aa12.03□□□□□ -0.48
NPLOC4-219ENST00000576713 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms