RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SASH1O94885 1247 aa17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 LPIN2Q92539 896 aa17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 NEUROD6Q96NK8 337 aa17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 DCTPP1Q9H773 170 aa17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 PRELPP51888 382 aa17.89■□□□□ 0.45
NPLOC4-209ENST00000572760 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
NPLOC4-209ENST00000572760 DOK7Q18PE1 504 aa17.89■□□□□ 0.45
NPLOC4-209ENST00000572760 VPS37DQ86XT2 251 aa17.89■□□□□ 0.45
NPLOC4-209ENST00000572760 RHPN1Q8TCX5 695 aa17.89■□□□□ 0.45
NPLOC4-209ENST00000572760 KIF1BPQ96EK5 621 aa17.89■□□□□ 0.45
NPLOC4-209ENST00000572760 CAVIN4Q5BKX8 364 aa17.88■□□□□ 0.45
NPLOC4-209ENST00000572760 ZNF804AQ7Z570 1209 aa17.88■□□□□ 0.45
NPLOC4-209ENST00000572760 DBNDD1Q9H9R9 158 aa17.88■□□□□ 0.45
NPLOC4-209ENST00000572760 A0A1B0GUL7 405 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 FGFR2P21802 821 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 KLRK1P26718 216 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 EIF6P56537 245 aaKnown RBP17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 TIMM10P62072 90 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 GORABQ5T7V8 394 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 C15orf52Q6ZUT6 534 aaKnown RBP17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 TXNRD3Q86VQ6 643 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 LRRCC1Q9C099 1032 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 GPR108Q9NPR9 543 aa17.87■□□□□ 0.45
NPLOC4-209ENST00000572760 ARAP2Q8WZ64 1704 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 ECE2O60344 883 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 HIBADHP31937 336 aaKnown RBP17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 GYG1P46976 350 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 TNNI3KQ59H18 835 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 COA1Q9GZY4 146 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 ZNRF3Q9ULT6 936 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 FPGT-TNNI3KV9GXZ4 949 aa17.86■□□□□ 0.45
NPLOC4-209ENST00000572760 SCN9AQ15858 1988 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 ZNF609O15014 1411 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 IGHDP01880 384 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 AACSQ86V21 672 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 XAGE2Q96GT9 111 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 FAM84BQ96KN1 310 aaPredicted RBP17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 CD209Q9NNX6 404 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 GNL3LQ9NVN8 582 aaKnown RBP17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 PSME4Q14997 1843 aa17.84■□□□□ 0.45
NPLOC4-209ENST00000572760 COL4A5P29400 1685 aa17.83■□□□□ 0.45
NPLOC4-209ENST00000572760 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 IFIT2P09913 472 aaKnown RBP17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 ADORA1P30542 326 aa17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 BCAMP50895 628 aa17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.44
NPLOC4-209ENST00000572760 IRS2Q9Y4H2 1338 aa17.82■□□□□ 0.44
NPLOC4-209ENST00000572760 FZD9O00144 591 aa17.82■□□□□ 0.44
NPLOC4-209ENST00000572760 ERICH6BQ5W0A0 696 aa17.82■□□□□ 0.44
NPLOC4-209ENST00000572760 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
NPLOC4-209ENST00000572760 FBXO33Q7Z6M2 555 aa17.82■□□□□ 0.44
NPLOC4-209ENST00000572760 EAF2Q96CJ1 260 aaPredicted RBP17.82■□□□□ 0.44
NPLOC4-209ENST00000572760 RAD17O75943 681 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 TNIP1Q15025 636 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 CCDC158Q5M9N0 1113 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 CIAPIN1Q6FI81 312 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 DBNDD2Q9BQY9 259 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 IQSEC3Q9UPP2 1182 aaPredicted RBP17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 GJA3Q9Y6H8 435 aa17.81■□□□□ 0.44
NPLOC4-209ENST00000572760 YDJCA8MPS7 323 aa17.8■□□□□ 0.44
NPLOC4-209ENST00000572760 IL1R1P14778 569 aa17.8■□□□□ 0.44
NPLOC4-209ENST00000572760 CXCL9Q07325 125 aa17.8■□□□□ 0.44
NPLOC4-209ENST00000572760 TTC39AQ5SRH9 613 aa17.8■□□□□ 0.44
NPLOC4-209ENST00000572760 CCDC102BQ68D86 513 aa17.8■□□□□ 0.44
NPLOC4-209ENST00000572760 SMC5Q8IY18 1101 aa17.8■□□□□ 0.44
NPLOC4-209ENST00000572760 ZNF541Q9H0D2 1346 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 USP17L3A6NCW0 530 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 USP17L4A6NCW7 530 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 PHKA1P46020 1223 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 GTF2IP78347 998 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 TTLL5Q6EMB2 1281 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 USP17L1Q7RTZ2 530 aa17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 TDRD7Q8NHU6 1098 aaKnown RBP17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
NPLOC4-209ENST00000572760 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
NPLOC4-209ENST00000572760 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
NPLOC4-209ENST00000572760 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
NPLOC4-209ENST00000572760 PSMD14O00487 310 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 DDNO94850 711 aaPredicted RBP17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 YY1P25490 414 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 GPC2Q8N158 579 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 JAG2Q9Y219 1238 aa17.77■□□□□ 0.44
NPLOC4-209ENST00000572760 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms