RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-208	ENST00000570688	HDAC5	Q9UQL6	1122 aa		13.88	□□□□□ -0.19
ABR-208	ENST00000570688	EXOC6B	Q9Y2D4	811 aa		13.88	□□□□□ -0.19
ABR-208	ENST00000570688	GLTPD2	A6NH11	291 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	RAD17	O75943	681 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	IL15	P40933	162 aa	Predicted RBP	13.87	□□□□□ -0.19
ABR-208	ENST00000570688	GYG1	P46976	350 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	UBE4A	Q14139	1066 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	NIM1K	Q8IY84	436 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	MXD3	Q9BW11	206 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	FBXO3	Q9UK99	471 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	ZNF609	O15014	1411 aa		13.87	□□□□□ -0.19
ABR-208	ENST00000570688	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.87	□□□□□ -0.19
ABR-208	ENST00000570688	FBXO33	Q7Z6M2	555 aa		13.86	□□□□□ -0.19
ABR-208	ENST00000570688	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.86	□□□□□ -0.19
ABR-208	ENST00000570688	EYA3	Q99504	573 aa		13.86	□□□□□ -0.19
ABR-208	ENST00000570688	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.86	□□□□□ -0.19
ABR-208	ENST00000570688	TMX4	Q9H1E5	349 aa	Predicted RBP	13.86	□□□□□ -0.19
ABR-208	ENST00000570688	CD209	Q9NNX6	404 aa		13.86	□□□□□ -0.19
ABR-208	ENST00000570688	PSMD14	O00487	310 aa		13.85	□□□□□ -0.19
ABR-208	ENST00000570688	KIF3C	O14782	793 aa		13.85	□□□□□ -0.19
ABR-208	ENST00000570688	SURF6	O75683	361 aa	Known RBP	13.85	□□□□□ -0.19
ABR-208	ENST00000570688	BCAM	P50895	628 aa		13.85	□□□□□ -0.19
ABR-208	ENST00000570688	SCNN1D	P51172	638 aa		13.85	□□□□□ -0.19
ABR-208	ENST00000570688	TIMM10	P62072	90 aa		13.85	□□□□□ -0.19
ABR-208	ENST00000570688	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.85	□□□□□ -0.19
ABR-208	ENST00000570688	AKAP11	Q9UKA4	1901 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	ADAMTSL1	Q8N6G6	1762 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	PUM3	Q15397	648 aa	Known RBP	13.84	□□□□□ -0.19
ABR-208	ENST00000570688	GRIK5	Q16478	980 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	ATP2B3	Q16720	1220 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	CERS5	Q8N5B7	392 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	TDRD7	Q8NHU6	1098 aa	Known RBP	13.84	□□□□□ -0.19
ABR-208	ENST00000570688	JDP2	Q8WYK2	163 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.84	□□□□□ -0.19
ABR-208	ENST00000570688	GML	Q99445	158 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	TLR7	Q9NYK1	1049 aa	Known RBP	13.84	□□□□□ -0.19
ABR-208	ENST00000570688	CEP126	Q9P2H0	1117 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.84	□□□□□ -0.19
ABR-208	ENST00000570688	JAG2	Q9Y219	1238 aa		13.84	□□□□□ -0.19
ABR-208	ENST00000570688	EGFR	P00533	1210 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	VIL1	P09327	827 aa	Known RBP	13.83	□□□□□ -0.2
ABR-208	ENST00000570688	POTEI	P0CG38	1075 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	POTEJ	P0CG39	1038 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	IL1R1	P14778	569 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	PHKA1	P46020	1223 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	DACT2	Q5SW24	774 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	EAF2	Q96CJ1	260 aa	Predicted RBP	13.83	□□□□□ -0.2
ABR-208	ENST00000570688	COA1	Q9GZY4	146 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	MYH13	Q9UKX3	1938 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688	SCN4A	P35499	1836 aa		13.83	□□□□□ -0.2
ABR-208	ENST00000570688		A0A1B0GUL7	405 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	IGHD	P01880	384 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	EPS15	P42566	896 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	KCNJ4	P48050	445 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	GMPS	P49915	693 aa	Predicted RBP	13.82	□□□□□ -0.2
ABR-208	ENST00000570688	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
ABR-208	ENST00000570688	CIAPIN1	Q6FI81	312 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	PODN	Q7Z5L7	613 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	GPC2	Q8N158	579 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	LPIN2	Q92539	896 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	RRAGC	Q9HB90	399 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	GJA3	Q9Y6H8	435 aa		13.82	□□□□□ -0.2
ABR-208	ENST00000570688	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.82	□□□□□ -0.2
ABR-208	ENST00000570688	HIBADH	P31937	336 aa	Known RBP	13.81	□□□□□ -0.2
ABR-208	ENST00000570688	EIF6	P56537	245 aa	Known RBP	13.81	□□□□□ -0.2
ABR-208	ENST00000570688	SCARF1	Q14162	830 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	TNNI3K	Q59H18	835 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	RHPN1	Q8TCX5	695 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	DBNDD2	Q9BQY9	259 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	DCTPP1	Q9H773	170 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	IL1RAPL2	Q9NP60	686 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	DBNL	Q9UJU6	430 aa	Known RBP	13.81	□□□□□ -0.2
ABR-208	ENST00000570688	FPGT-TNNI3K	V9GXZ4	949 aa		13.81	□□□□□ -0.2
ABR-208	ENST00000570688	SMARCA5	O60264	1052 aa	Predicted RBP	13.8	□□□□□ -0.2
ABR-208	ENST00000570688	GTF2I	P78347	998 aa		13.8	□□□□□ -0.2
ABR-208	ENST00000570688	PI16	Q6UXB8	463 aa		13.8	□□□□□ -0.2
ABR-208	ENST00000570688	XAGE2	Q96GT9	111 aa		13.8	□□□□□ -0.2
ABR-208	ENST00000570688	GPR108	Q9NPR9	543 aa		13.8	□□□□□ -0.2
ABR-208	ENST00000570688	AOX1	Q06278	1338 aa		13.8	□□□□□ -0.2
ABR-208	ENST00000570688	USP17L3	A6NCW0	530 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	USP17L4	A6NCW7	530 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	APBB1	O00213	710 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	IFIT1	P09914	478 aa	Known RBP	13.79	□□□□□ -0.2
ABR-208	ENST00000570688	SLC5A1	P13866	664 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	HIRA	P54198	1017 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-208	ENST00000570688	CCDC102B	Q68D86	513 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-208	ENST00000570688	USP17L1	Q7RTZ2	530 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	TRPM4	Q8TD43	1214 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-208	ENST00000570688	CHMP4B	Q9H444	224 aa	Known RBP	13.79	□□□□□ -0.2
ABR-208	ENST00000570688	GPRC5D	Q9NZD1	345 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	PCDHAC2	Q9Y5I4	1007 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	FAM205A	Q6ZU69	1335 aa		13.79	□□□□□ -0.2
ABR-208	ENST00000570688	POLR2A	P24928	1970 aa	Known RBP	13.78	□□□□□ -0.2
ABR-208	ENST00000570688	RASGRF1	Q13972	1273 aa		13.78	□□□□□ -0.2
ABR-208	ENST00000570688	STRIP1	Q5VSL9	837 aa		13.78	□□□□□ -0.2
ABR-208	ENST00000570688	DPY19L2	Q6NUT2	758 aa		13.78	□□□□□ -0.2
ABR-208	ENST00000570688	ZNF804A	Q7Z570	1209 aa		13.78	□□□□□ -0.2
ABR-208	ENST00000570688	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.78	□□□□□ -0.2

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