RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 RNF208Q9H0X6 261 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 MAP3K15Q6ZN16 1313 aa9.01□□□□□ -0.97
HERPUD1-217ENST00000569429 MGAMO43451 1857 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 SGPL1O95470 568 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 GPTP24298 496 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 NEUROD1Q13562 356 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 KIF22Q14807 665 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 DOK7Q18PE1 504 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 PPP1R42Q7Z4L9 355 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 CNKSR2Q8WXI2 1034 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 EYA3Q99504 573 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 POLLQ9UGP5 575 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 ZDBF2Q9HCK1 2354 aa9□□□□□ -0.97
HERPUD1-217ENST00000569429 BTBD11A6QL63 1104 aa8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 GRK4P32298 578 aa8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 MAGEA10P43363 369 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 LACTBP83111 547 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 NBPF9Q3BBW0 867 aa8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 DDX46Q7L014 1031 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 CLMNQ96JQ2 1002 aa8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 FAM161BQ96MY7 647 aa8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 CDX2Q99626 313 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 ARHGAP39Q9C0H5 1083 aa8.99□□□□□ -0.97
HERPUD1-217ENST00000569429 ECM29Q5VYK3 1845 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 CACNA1GO43497 2377 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 DNAH12Q6ZR08 3092 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 GJA5P36382 358 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 TAF1CQ15572 869 aaPredicted RBP8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 PARP10Q53GL7 1025 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 UBE2OQ9C0C9 1292 aaKnown RBP8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 ZMYND8Q9ULU4 1186 aaPredicted RBP8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 NSFL1CQ9UNZ2 370 aaKnown RBP8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 RIPOR2Q9Y4F9 1068 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 OTOFQ9HC10 1997 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 FAM205AQ6ZU69 1335 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 CEMIPQ8WUJ3 1361 aa8.98□□□□□ -0.97
HERPUD1-217ENST00000569429 TCF20Q9UGU0 1960 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 WNT10BO00744 389 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 UBXN2AP68543 259 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 APOBEC3FQ8IUX4 373 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 MS4A4AQ96JQ5 239 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 SRRDQ9UH36 339 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 HCN4Q9Y3Q4 1203 aa8.97□□□□□ -0.97
HERPUD1-217ENST00000569429 PPP1R12BO60237 982 aaPredicted RBP8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 TLR2O60603 784 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 HMOX1P09601 288 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 HOXD10P28358 340 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 C7orf61Q8IZ16 206 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 RAET1EQ8TD07 263 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 PAWRQ96IZ0 340 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 UTP14AQ9BVJ6 771 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 C1QTNF1Q9BXJ1 281 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 ZC3H12CQ9C0D7 883 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 FZD1Q9UP38 647 aa8.96□□□□□ -0.98
HERPUD1-217ENST00000569429 MMP14P50281 582 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 GPSM2P81274 684 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 KIF6Q6ZMV9 814 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 TTLL7Q6ZT98 887 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 NECAB2Q7Z6G3 386 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 ALYREFQ86V81 257 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 HELBQ8NG08 1087 aaPredicted RBP8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 TBC1D16Q8TBP0 767 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 UNC93B1Q9H1C4 597 aa8.95□□□□□ -0.98
HERPUD1-217ENST00000569429 CACNA1BQ00975 2339 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 G3V3G9 751 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 TFRCP02786 760 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 SYN1P17600 705 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 DCAF8Q5TAQ9 597 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 FAM43AQ8N2R8 423 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 GAS2L2Q8NHY3 880 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 CRISPLD2Q9H0B8 497 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 SEMA6BQ9H3T3 888 aa8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 ZCCHC17Q9NP64 241 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.94□□□□□ -0.98
HERPUD1-217ENST00000569429 USP17L3A6NCW0 530 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 USP17L4A6NCW7 530 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 ECM2O94769 699 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 OSBPP22059 807 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 CTGFP29279 349 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 USP17L1Q7RTZ2 530 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 NGEFQ8N5V2 710 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 MYLIPQ8WY64 445 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 P2RX7Q99572 595 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 PODXL2Q9NZ53 605 aa8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 BIN2Q9UBW5 565 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-217ENST00000569429 COL4A1P02462 1669 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 MYPNQ86TC9 1320 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms