RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ZKSCAN3Q9BRR0 538 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 DCTN4Q9UJW0 460 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 AMOTL2Q9Y2J4 779 aa6.1□□□□□ -1.43
HMGB1P6-201ENST00000569046 SPDYE3A6NKU9 549 aa6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 SMNDC1O75940 238 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 MAPK1P28482 360 aa6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 PRRT3Q5FWE3 981 aa6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 SHISA2Q6UWI4 295 aa6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 TMC1Q8TDI8 760 aa6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 SH2B1Q9NRF2 756 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P6-201ENST00000569046 SELPP16109 830 aa6.08□□□□□ -1.44
HMGB1P6-201ENST00000569046 EPHA1P21709 976 aa6.08□□□□□ -1.44
HMGB1P6-201ENST00000569046 SETDB1Q15047 1291 aa6.08□□□□□ -1.44
HMGB1P6-201ENST00000569046 GPAT2Q6NUI2 795 aa6.08□□□□□ -1.44
HMGB1P6-201ENST00000569046 TXNDC11Q6PKC3 985 aa6.08□□□□□ -1.44
HMGB1P6-201ENST00000569046 OSMRQ99650 979 aa6.08□□□□□ -1.44
HMGB1P6-201ENST00000569046 NACADO15069 1562 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 BICRAQ9NZM4 1560 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 PDE2AO00408 941 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 TM4SF5O14894 197 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 PROCP04070 461 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 EDN3P14138 238 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 ELNP15502 786 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 CDC25BP30305 580 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 RAC1P63000 192 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 DSC3Q14574 896 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 FBXO11Q86XK2 927 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 GALNT12Q8IXK2 581 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 NXPE3Q969Y0 559 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 ALKBH8Q96BT7 664 aaKnown RBP6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 DMRTB1Q96MA1 342 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
HMGB1P6-201ENST00000569046 A0A1W2PP55 124 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 PATL2C9JE40 543 aaKnown RBP6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 LINC01387J3KSC0 135 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 CPNE3O75131 537 aaKnown RBP6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 CDC27P30260 824 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 DTWD1Q8N5C7 304 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 TMEM102Q8N9M5 508 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 GALNT11Q8NCW6 608 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 SPOCK3Q9BQ16 436 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 NPHS2Q9NP85 383 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 PPME1Q9Y570 386 aa6.06□□□□□ -1.44
HMGB1P6-201ENST00000569046 METTL12A8MUP2 240 aa6.05□□□□□ -1.44
HMGB1P6-201ENST00000569046 DLL1O00548 723 aa6.05□□□□□ -1.44
HMGB1P6-201ENST00000569046 TREHO43280 583 aa6.05□□□□□ -1.44
HMGB1P6-201ENST00000569046 PTPRAP18433 802 aa6.05□□□□□ -1.44
HMGB1P6-201ENST00000569046 CSRNP1Q96S65 589 aa6.05□□□□□ -1.44
HMGB1P6-201ENST00000569046 SOX13Q9UN79 622 aa6.05□□□□□ -1.44
HMGB1P6-201ENST00000569046 APBA3O96018 575 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 NEFLP07196 543 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 HGSNATQ68CP4 663 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 SND1Q7KZF4 910 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 CACTIN-AS1Q8N1I8 211 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 CCDC74AQ96AQ1 378 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 ASB16Q96NS5 453 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 TCF12Q99081 682 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 CARD10Q9BWT7 1032 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 BHLHE41Q9C0J9 482 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 DNAJC25Q9H1X3 360 aa6.04□□□□□ -1.44
HMGB1P6-201ENST00000569046 MSTNO14793 375 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 GRIA4P48058 902 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 PI16Q6UXB8 463 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 VN1R5Q7Z5H4 357 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 CCNJLQ8IV13 435 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 ASAP3Q8TDY4 903 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 EPS8L3Q8TE67 593 aaKnown RBP6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 LENG1Q96BZ8 264 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 SETDB2Q96T68 719 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 MUC3BQ9H195 1237 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 KCNK4Q9NYG8 393 aa6.03□□□□□ -1.44
HMGB1P6-201ENST00000569046 H3BRJ5 948 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 FSCN2O14926 492 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 PLCB3Q01970 1234 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 ADGRE1Q14246 886 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 MBTPS1Q14703 1052 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 FOXD4L6Q3SYB3 417 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 KIAA0319Q5VV43 1072 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 FOXD4L3Q6VB84 417 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 BSNDQ8WZ55 320 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 KLHDC7BQ96G42 594 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 LIN7BQ9HAP6 207 aa6.02□□□□□ -1.45
HMGB1P6-201ENST00000569046 CC2D2AQ9P2K1 1620 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 PNMA6FA0A0J9YX94 578 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 C9orf172C9J069 976 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 DDX3YO15523 660 aaKnown RBP6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 IGHA1P01876 353 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 FMR1Q06787 632 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 ENOX2Q16206 610 aaKnown RBP6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 IGF2-ASQ6U949 168 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 ZSCAN29Q8IWY8 852 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 HOMEZQ8IX15 550 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 NACC1Q96RE7 527 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 SRA1Q9HD15 236 aaKnown RBP6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 USP21Q9UK80 565 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 WWC3Q9ULE0 1092 aa6.01□□□□□ -1.45
HMGB1P6-201ENST00000569046 A0A096LPE4 126 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms