RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 NEK1Q96PY6 1258 aa23■■□□□ 1.27
AC009041.2-204ENST00000568394 SMC1AQ14683 1233 aaKnown RBP22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 COPS6Q7L5N1 327 aa22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 NEUROD6Q96NK8 337 aa22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 TM6SF1Q9BZW5 370 aa22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 CRB1P82279 1406 aa22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 APOBRQ0VD83 1088 aa22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 TXLNBQ8N3L3 684 aa22.99■■□□□ 1.27
AC009041.2-204ENST00000568394 ARMCX5Q6P1M9 558 aa22.98■■□□□ 1.27
AC009041.2-204ENST00000568394 ZBTB3Q9H5J0 574 aa22.98■■□□□ 1.27
AC009041.2-204ENST00000568394 XAGE3Q8WTP9 111 aa22.98■■□□□ 1.27
AC009041.2-204ENST00000568394 CTAGE5O15320 804 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 CDC25BP30305 580 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 AK7Q96M32 723 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 LCMT1Q9UIC8 334 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 OVOS2A0A0J9YW53 1432 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 OVOS2Q6IE36 1432 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 RESTQ13127 1097 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 KARSQ15046 597 aaKnown RBP22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 UBE3BQ7Z3V4 1068 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 CAVIN2O95810 425 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 ATP1A3P13637 1013 aa22.97■■□□□ 1.27
AC009041.2-204ENST00000568394 ORC3Q9UBD5 711 aaPredicted RBP22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 ETF1P62495 437 aaKnown RBP22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 MAP4K1Q92918 833 aa22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 ZNF396Q96N95 335 aaPredicted RBP22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 CWC15Q9P013 229 aaKnown RBP22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 VPS18Q9P253 973 aa22.96■■□□□ 1.27
AC009041.2-204ENST00000568394 H2AFXP16104 143 aaPredicted RBP22.95■■□□□ 1.27
AC009041.2-204ENST00000568394 HSP90AB3PQ58FF7 597 aa22.95■■□□□ 1.27
AC009041.2-204ENST00000568394 ARFGAP3Q9NP61 516 aa22.95■■□□□ 1.27
AC009041.2-204ENST00000568394 NEURL4Q96JN8 1562 aa22.95■■□□□ 1.26
AC009041.2-204ENST00000568394 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.95■■□□□ 1.26
AC009041.2-204ENST00000568394 EAF2Q96CJ1 260 aaPredicted RBP22.95■■□□□ 1.26
AC009041.2-204ENST00000568394 SLC3A2P08195 630 aaKnown RBP22.95■■□□□ 1.26
AC009041.2-204ENST00000568394 FAM160A1Q05DH4 1040 aa22.95■■□□□ 1.26
AC009041.2-204ENST00000568394 LEKR1Q6ZMV7 388 aa22.95■■□□□ 1.26
AC009041.2-204ENST00000568394 ERBB3P21860 1342 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 PTPDC1A2A3K4 754 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 TOM1L2Q6ZVM7 507 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 CREBRFQ8IUR6 639 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 CCDC150Q8NCX0 1101 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 ZNF496Q96IT1 587 aaPredicted RBP22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 TSPYL1Q9H0U9 437 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 BICC1Q9H694 974 aaKnown RBP22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 PUF60Q9UHX1 559 aaKnown RBP22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 TTC41PQ6P2S7 1318 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 SPATA31D1Q6ZQQ2 1576 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 MARCKSP29966 332 aaPredicted RBP22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 CASQ1P31415 396 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 UBASH3AP57075 661 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 PLEKHA4Q9H4M7 779 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 CDC42BPGQ6DT37 1551 aa22.94■■□□□ 1.26
AC009041.2-204ENST00000568394 SARM1Q6SZW1 724 aa22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 ZSCAN16Q9H4T2 348 aaPredicted RBP22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 MYO1CO00159 1063 aa22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 EPB41L2O43491 1005 aaKnown RBP22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 NDUFA8P51970 172 aa22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 SCRN1Q12765 414 aa22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 MRPS27Q92552 414 aaKnown RBP22.93■■□□□ 1.26
AC009041.2-204ENST00000568394 CCDC102AQ96A19 550 aa22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 SUCLG2Q96I99 432 aa22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 GPATCH11Q8N954 259 aa22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 RNF216Q9NWF9 866 aaPredicted RBP22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 TOP1P11387 765 aaKnown RBP22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 GTF2A1P52655 376 aaPredicted RBP22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 NBPF11Q86T75 865 aa22.92■■□□□ 1.26
AC009041.2-204ENST00000568394 POLA2Q14181 598 aa22.91■■□□□ 1.26
AC009041.2-204ENST00000568394 KIF20BQ96Q89 1820 aa22.91■■□□□ 1.26
AC009041.2-204ENST00000568394 FANCCQ00597 558 aa22.91■■□□□ 1.26
AC009041.2-204ENST00000568394 DESI2Q9BSY9 194 aa22.91■■□□□ 1.26
AC009041.2-204ENST00000568394 PRDM11Q9NQV5 511 aa22.91■■□□□ 1.26
AC009041.2-204ENST00000568394 SNRKQ9NRH2 765 aa22.91■■□□□ 1.26
AC009041.2-204ENST00000568394 HIP1O00291 1037 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 SYNE3Q6ZMZ3 975 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 GJB4Q9NTQ9 266 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 SASH3O75995 380 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 RBM43Q6ZSC3 357 aaKnown RBP22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 PCDHA7Q9UN72 937 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 WWC2Q6AWC2 1192 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 CPLX3Q8WVH0 158 aa22.9■■□□□ 1.26
AC009041.2-204ENST00000568394 GOLGA6L1Q8N7Z2 621 aa22.89■■□□□ 1.26
AC009041.2-204ENST00000568394 CCDC12Q8WUD4 166 aaPredicted RBP22.89■■□□□ 1.26
AC009041.2-204ENST00000568394 NRXN3Q9Y4C0 1643 aa22.89■■□□□ 1.25
AC009041.2-204ENST00000568394 RGPD8O14715 1765 aaPredicted RBP22.89■■□□□ 1.25
AC009041.2-204ENST00000568394 PPP2R3AQ06190 1150 aa22.89■■□□□ 1.25
AC009041.2-204ENST00000568394 EPHA10Q5JZY3 1008 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 ZNF594Q96JF6 807 aaPredicted RBP22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 TULP2O00295 520 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 LZTFL1Q9NQ48 299 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 DBF4Q9UBU7 674 aaPredicted RBP22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 ARHGEF10O15013 1369 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 A1BGP04217 495 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 CABP4P57796 275 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 ERC1Q8IUD2 1116 aa22.88■■□□□ 1.25
AC009041.2-204ENST00000568394 BEND3Q5T5X7 828 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms