RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 ZNRF3Q9ULT6 936 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 SCN4AP35499 1836 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 FZD9O00144 591 aa15.06■□□□□ 0
SF3B3-208ENST00000567250 SURF6O75683 361 aaKnown RBP15.06■□□□□ 0
SF3B3-208ENST00000567250 C15orf52Q6ZUT6 534 aaKnown RBP15.06■□□□□ 0
SF3B3-208ENST00000567250 ZNF804AQ7Z570 1209 aa15.06■□□□□ 0
SF3B3-208ENST00000567250 VGLL2Q8N8G2 317 aa15.06■□□□□ 0
SF3B3-208ENST00000567250 AKAP2Q9Y2D5 859 aa15.06■□□□□ 0
SF3B3-208ENST00000567250 ZNF646O15015 1829 aaPredicted RBP15.06■□□□□ 0
SF3B3-208ENST00000567250 SCN9AQ15858 1988 aa15.05■□□□□ 0
SF3B3-208ENST00000567250 ECE2O60344 883 aa15.05■□□□□ -0
SF3B3-208ENST00000567250 IFIT1P09914 478 aaKnown RBP15.05■□□□□ -0
SF3B3-208ENST00000567250 SLC5A1P13866 664 aa15.05■□□□□ -0
SF3B3-208ENST00000567250 ERC1Q8IUD2 1116 aa15.05■□□□□ -0
SF3B3-208ENST00000567250 GPR101Q96P66 508 aaPredicted RBP15.05■□□□□ -0
SF3B3-208ENST00000567250 COA1Q9GZY4 146 aa15.05■□□□□ -0
SF3B3-208ENST00000567250 ZNF609O15014 1411 aa15.05■□□□□ -0
SF3B3-208ENST00000567250 ATP2B3Q16720 1220 aa15.04■□□□□ -0
SF3B3-208ENST00000567250 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
SF3B3-208ENST00000567250 PODNQ7Z5L7 613 aa15.04■□□□□ -0
SF3B3-208ENST00000567250 LPIN2Q92539 896 aa15.04■□□□□ -0
SF3B3-208ENST00000567250 DBNDD1Q9H9R9 158 aa15.04■□□□□ -0
SF3B3-208ENST00000567250 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
SF3B3-208ENST00000567250 ZNF541Q9H0D2 1346 aa15.03■□□□□ -0
SF3B3-208ENST00000567250 GLTPD2A6NH11 291 aa15.03■□□□□ -0
SF3B3-208ENST00000567250 TNIP1Q15025 636 aa15.03■□□□□ -0
SF3B3-208ENST00000567250 VPS37DQ86XT2 251 aa15.03■□□□□ -0
SF3B3-208ENST00000567250 GPC2Q8N158 579 aa15.03■□□□□ -0
SF3B3-208ENST00000567250 IRS2Q9Y4H2 1338 aa15.02■□□□□ -0
SF3B3-208ENST00000567250 DOK7Q18PE1 504 aa15.02■□□□□ -0
SF3B3-208ENST00000567250 CIAPIN1Q6FI81 312 aa15.02■□□□□ -0
SF3B3-208ENST00000567250 EXOC6BQ9Y2D4 811 aa15.02■□□□□ -0
SF3B3-208ENST00000567250 FGFR2P21802 821 aa15.01□□□□□ -0.01
SF3B3-208ENST00000567250 KLRK1P26718 216 aa15.01□□□□□ -0.01
SF3B3-208ENST00000567250 TFCP2Q12800 502 aa15.01□□□□□ -0.01
SF3B3-208ENST00000567250 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
SF3B3-208ENST00000567250 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
SF3B3-208ENST00000567250 GPR108Q9NPR9 543 aa15.01□□□□□ -0.01
SF3B3-208ENST00000567250 MYO3BQ8WXR4 1341 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 A0A1B0GUL7 405 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 IQCA1LA6NCM1 817 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 YDJCA8MPS7 323 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 SNAP23O00161 211 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 RAB11FIP3O75154 756 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 HIBADHP31937 336 aaKnown RBP15□□□□□ -0.01
SF3B3-208ENST00000567250 CXCL9Q07325 125 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 TXNRD3Q86VQ6 643 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 EXOC6Q8TAG9 804 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 KIF1BPQ96EK5 621 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 CD209Q9NNX6 404 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 GJA3Q9Y6H8 435 aa15□□□□□ -0.01
SF3B3-208ENST00000567250 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 WTIPA6NIX2 430 aaPredicted RBP14.99□□□□□ -0.01
SF3B3-208ENST00000567250 RAD17O75943 681 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 SASH1O94885 1247 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 IL1R1P14778 569 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
SF3B3-208ENST00000567250 GYG1P46976 350 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
SF3B3-208ENST00000567250 ZNF526Q8TF50 670 aaPredicted RBP14.99□□□□□ -0.01
SF3B3-208ENST00000567250 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
SF3B3-208ENST00000567250 GNL3LQ9NVN8 582 aaKnown RBP14.99□□□□□ -0.01
SF3B3-208ENST00000567250 FRAT2O75474 233 aaPredicted RBP14.98□□□□□ -0.01
SF3B3-208ENST00000567250 DDNO94850 711 aaPredicted RBP14.98□□□□□ -0.01
SF3B3-208ENST00000567250 NEFLP07196 543 aa14.98□□□□□ -0.01
SF3B3-208ENST00000567250 RPS12P25398 132 aaKnown RBP14.98□□□□□ -0.01
SF3B3-208ENST00000567250 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
SF3B3-208ENST00000567250 STRIP1Q5VSL9 837 aa14.98□□□□□ -0.01
SF3B3-208ENST00000567250 FBXW7Q969H0 707 aa14.98□□□□□ -0.01
SF3B3-208ENST00000567250 PCDHB15Q9Y5E8 787 aa14.98□□□□□ -0.01
SF3B3-208ENST00000567250 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
SF3B3-208ENST00000567250 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
SF3B3-208ENST00000567250 PSMD14O00487 310 aa14.97□□□□□ -0.01
SF3B3-208ENST00000567250 SEMA3EO15041 775 aa14.97□□□□□ -0.01
SF3B3-208ENST00000567250 IRX6P78412 446 aaPredicted RBP14.97□□□□□ -0.01
SF3B3-208ENST00000567250 GORABQ5T7V8 394 aa14.97□□□□□ -0.01
SF3B3-208ENST00000567250 CLASRPQ8N2M8 674 aaKnown RBP14.97□□□□□ -0.01
SF3B3-208ENST00000567250 ZNF784Q8NCA9 323 aaPredicted RBP14.97□□□□□ -0.01
SF3B3-208ENST00000567250 RHPN1Q8TCX5 695 aa14.97□□□□□ -0.01
SF3B3-208ENST00000567250 FAM84BQ96KN1 310 aaPredicted RBP14.97□□□□□ -0.01
SF3B3-208ENST00000567250 NEUROD6Q96NK8 337 aa14.97□□□□□ -0.01
SF3B3-208ENST00000567250 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
SF3B3-208ENST00000567250 TTLL5Q6EMB2 1281 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 RSBN1LQ6PCB5 846 aaPredicted RBP14.96□□□□□ -0.01
SF3B3-208ENST00000567250 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 AGBL3Q8NEM8 1001 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 TDRD7Q8NHU6 1098 aaKnown RBP14.96□□□□□ -0.01
SF3B3-208ENST00000567250 XAGE2Q96GT9 111 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 LRRCC1Q9C099 1032 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
SF3B3-208ENST00000567250 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
SF3B3-208ENST00000567250 MAST2Q6P0Q8 1798 aa14.96□□□□□ -0.02
SF3B3-208ENST00000567250 APBB1O00213 710 aa14.95□□□□□ -0.02
SF3B3-208ENST00000567250 VIL1P09327 827 aaKnown RBP14.95□□□□□ -0.02
SF3B3-208ENST00000567250 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-208ENST00000567250 FKBP1AP62942 108 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms