RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ZBTB43O43298 467 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
CDH1-210ENST00000566612 SSRP1Q08945 709 aaKnown RBP13.47□□□□□ -0.25
CDH1-210ENST00000566612 STX1AQ16623 288 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 LEO1Q8WVC0 666 aaPredicted RBP13.47□□□□□ -0.25
CDH1-210ENST00000566612 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
CDH1-210ENST00000566612 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
CDH1-210ENST00000566612 RRP9O43818 475 aaKnown RBP13.46□□□□□ -0.25
CDH1-210ENST00000566612 LIG1P18858 919 aa13.46□□□□□ -0.25
CDH1-210ENST00000566612 ERCC4Q92889 916 aaPredicted RBP13.46□□□□□ -0.25
CDH1-210ENST00000566612 ANKARQ7Z5J8 1434 aa13.46□□□□□ -0.25
CDH1-210ENST00000566612 A0A1B0GVL5 298 aa13.46□□□□□ -0.26
CDH1-210ENST00000566612 MAP7D2Q96T17 732 aa13.46□□□□□ -0.26
CDH1-210ENST00000566612 ZKSCAN3Q9BRR0 538 aa13.46□□□□□ -0.26
CDH1-210ENST00000566612 ASAP1Q9ULH1 1129 aa13.46□□□□□ -0.26
CDH1-210ENST00000566612 ADCY9O60503 1353 aa13.46□□□□□ -0.26
CDH1-210ENST00000566612 GPAA1O43292 621 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 OFD1O75665 1012 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 UQCRFS1P1P0C7P4 283 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 MAGEB6Q8N7X4 407 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 CNNM3Q8NE01 707 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 WASF1Q92558 559 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 CYP7A1P22680 504 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 PTGS1P23219 599 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 DDB1Q16531 1140 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
CDH1-210ENST00000566612 MRPS27Q92552 414 aaKnown RBP13.45□□□□□ -0.26
CDH1-210ENST00000566612 E7EWF7 191 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 CYP21A2P08686 494 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 AGLP35573 1532 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 B4E1Z4 1266 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 TNNT1P13805 278 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 NGLY1Q96IV0 654 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 HAUS7Q99871 368 aa13.45□□□□□ -0.26
CDH1-210ENST00000566612 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 SFPQP23246 707 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDH1-210ENST00000566612 ZPR1O75312 459 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 ATP2B2Q01814 1243 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 AOPEPQ8N6M6 819 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 CCDC196A0A1B0GTZ2 297 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 SPTLC2O15270 562 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 ADORA1P30542 326 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 PPP1R9BQ96SB3 815 aa13.44□□□□□ -0.26
CDH1-210ENST00000566612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDH1-210ENST00000566612 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 HSPD1P10809 573 aaKnown RBP13.43□□□□□ -0.26
CDH1-210ENST00000566612 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
CDH1-210ENST00000566612 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 JAG2Q9Y219 1238 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 SYKP43405 635 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 PTPN14Q15678 1187 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 TMC6Q7Z403 805 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 MYL10Q9BUA6 226 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 WTAPQ15007 396 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 MTERF4Q7Z6M4 381 aaKnown RBP13.43□□□□□ -0.26
CDH1-210ENST00000566612 APPBP2Q92624 585 aa13.43□□□□□ -0.26
CDH1-210ENST00000566612 MBD4O95243 580 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 MTX1Q13505 466 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 PI16Q6UXB8 463 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
CDH1-210ENST00000566612 RNF41Q9H4P4 317 aaPredicted RBP13.42□□□□□ -0.26
CDH1-210ENST00000566612 TECPR2O15040 1411 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 CHGBP05060 677 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 USP5P45974 858 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 KCNG4Q8TDN1 519 aa13.42□□□□□ -0.26
CDH1-210ENST00000566612 CCDC47Q96A33 483 aaKnown RBP13.42□□□□□ -0.26
CDH1-210ENST00000566612 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 NR1I2O75469 434 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 LMOD1P29536 600 aaPredicted RBP13.41□□□□□ -0.26
CDH1-210ENST00000566612 DZIP1Q86YF9 867 aaKnown RBP13.41□□□□□ -0.26
CDH1-210ENST00000566612 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
CDH1-210ENST00000566612 TXLNAP40222 546 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
CDH1-210ENST00000566612 PHKBQ93100 1093 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 ARMT1Q9H993 441 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 CLSTN1O94985 981 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 FILIP1LQ4L180 1135 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 CBX8Q9HC52 389 aa13.41□□□□□ -0.26
CDH1-210ENST00000566612 ADGRB2O60241 1585 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 IPO7O95373 1038 aaKnown RBP13.4□□□□□ -0.26
CDH1-210ENST00000566612 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 FGAP02671 866 aa13.4□□□□□ -0.26
CDH1-210ENST00000566612 SCRN1Q12765 414 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms