RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 GJA3Q9Y6H8 435 aa32.43■■■□□ 2.78
NME3-209ENST00000566600 PUM3Q15397 648 aaKnown RBP32.42■■■□□ 2.78
NME3-209ENST00000566600 TXNRD3Q86VQ6 643 aa32.42■■■□□ 2.78
NME3-209ENST00000566600 L3MBTL3Q96JM7 780 aaPredicted RBP32.42■■■□□ 2.78
NME3-209ENST00000566600 WDR90Q96KV7 1748 aa32.42■■■□□ 2.78
NME3-209ENST00000566600 RAD17O75943 681 aa32.41■■■□□ 2.78
NME3-209ENST00000566600 G3BP1Q13283 466 aaKnown RBP eCLIP32.41■■■□□ 2.78
NME3-209ENST00000566600 ZNF804AQ7Z570 1209 aa32.41■■■□□ 2.78
NME3-209ENST00000566600 NMRK2Q9NPI5 230 aa32.41■■■□□ 2.78
NME3-209ENST00000566600 IRS2Q9Y4H2 1338 aa32.41■■■□□ 2.78
NME3-209ENST00000566600 KLRK1P26718 216 aa32.4■■■□□ 2.78
NME3-209ENST00000566600 RRAGCQ9HB90 399 aa32.4■■■□□ 2.78
NME3-209ENST00000566600 HMMRO75330 724 aa32.39■■■□□ 2.78
NME3-209ENST00000566600 VEGFAP15692 232 aaPredicted RBP32.39■■■□□ 2.78
NME3-209ENST00000566600 IQCA1LA6NCM1 817 aa32.38■■■□□ 2.77
NME3-209ENST00000566600 IFIT1P09914 478 aaKnown RBP32.38■■■□□ 2.77
NME3-209ENST00000566600 LPIN2Q92539 896 aa32.37■■■□□ 2.77
NME3-209ENST00000566600 SLC5A1P13866 664 aa32.36■■■□□ 2.77
NME3-209ENST00000566600 FGFR2P21802 821 aa32.36■■■□□ 2.77
NME3-209ENST00000566600 SUPT16HQ9Y5B9 1047 aaKnown RBP32.36■■■□□ 2.77
NME3-209ENST00000566600 PSMD14O00487 310 aa32.35■■■□□ 2.77
NME3-209ENST00000566600 SURF6O75683 361 aaKnown RBP32.35■■■□□ 2.77
NME3-209ENST00000566600 CAVIN4Q5BKX8 364 aa32.35■■■□□ 2.77
NME3-209ENST00000566600 CD209Q9NNX6 404 aa32.35■■■□□ 2.77
NME3-209ENST00000566600 AKAP2Q9Y2D5 859 aa32.35■■■□□ 2.77
NME3-209ENST00000566600 NOP58Q9Y2X3 529 aaKnown RBP32.35■■■□□ 2.77
NME3-209ENST00000566600 USP17L3A6NCW0 530 aa32.34■■■□□ 2.77
NME3-209ENST00000566600 USP17L4A6NCW7 530 aa32.34■■■□□ 2.77
NME3-209ENST00000566600 LMOD1P29536 600 aaPredicted RBP32.34■■■□□ 2.77
NME3-209ENST00000566600 HIBADHP31937 336 aaKnown RBP32.34■■■□□ 2.77
NME3-209ENST00000566600 OS9Q13438 667 aaPredicted RBP32.34■■■□□ 2.77
NME3-209ENST00000566600 ATP2B3Q16720 1220 aa32.34■■■□□ 2.77
NME3-209ENST00000566600 USP17L1Q7RTZ2 530 aa32.34■■■□□ 2.77
NME3-209ENST00000566600 KCNQ5Q9NR82 932 aa32.34■■■□□ 2.77
NME3-209ENST00000566600 SCN4AP35499 1836 aa32.34■■■□□ 2.77
NME3-209ENST00000566600 VPS37DQ86XT2 251 aa32.33■■■□□ 2.77
NME3-209ENST00000566600 FAM84BQ96KN1 310 aaPredicted RBP32.33■■■□□ 2.77
NME3-209ENST00000566600 HACL1Q9UJ83 578 aa32.33■■■□□ 2.77
NME3-209ENST00000566600 SCN9AQ15858 1988 aa32.32■■■□□ 2.77
NME3-209ENST00000566600 POTECB2RU33 542 aa32.32■■■□□ 2.76
NME3-209ENST00000566600 KIF3CO14782 793 aa32.32■■■□□ 2.76
NME3-209ENST00000566600 VIL1P09327 827 aaKnown RBP32.32■■■□□ 2.76
NME3-209ENST00000566600 IL1R1P14778 569 aa32.32■■■□□ 2.76
NME3-209ENST00000566600 RPS12P25398 132 aaKnown RBP32.32■■■□□ 2.76
NME3-209ENST00000566600 TFCP2Q12800 502 aa32.32■■■□□ 2.76
NME3-209ENST00000566600 C16orf71Q8IYS4 520 aaPredicted RBP32.32■■■□□ 2.76
NME3-209ENST00000566600 CRBNQ96SW2 442 aa32.32■■■□□ 2.76
NME3-209ENST00000566600 PSME4Q14997 1843 aa32.31■■■□□ 2.76
NME3-209ENST00000566600 GYG1P46976 350 aa32.31■■■□□ 2.76
NME3-209ENST00000566600 GMPSP49915 693 aaPredicted RBP32.31■■■□□ 2.76
NME3-209ENST00000566600 HSP90AB4PQ58FF6 505 aa32.31■■■□□ 2.76
NME3-209ENST00000566600 STRIP1Q5VSL9 837 aa32.31■■■□□ 2.76
NME3-209ENST00000566600 AAMPQ13685 434 aa32.3■■■□□ 2.76
NME3-209ENST00000566600 FBXO33Q7Z6M2 555 aa32.3■■■□□ 2.76
NME3-209ENST00000566600 DPF2Q92785 391 aa32.3■■■□□ 2.76
NME3-209ENST00000566600 SCNN1DP51172 638 aa32.29■■■□□ 2.76
NME3-209ENST00000566600 SIRT2Q8IXJ6 389 aa32.29■■■□□ 2.76
NME3-209ENST00000566600 GPRC5DQ9NZD1 345 aa32.29■■■□□ 2.76
NME3-209ENST00000566600 TTLL5Q6EMB2 1281 aa32.28■■■□□ 2.76
NME3-209ENST00000566600 RSBN1LQ6PCB5 846 aaPredicted RBP32.28■■■□□ 2.76
NME3-209ENST00000566600 ERC1Q8IUD2 1116 aa32.28■■■□□ 2.76
NME3-209ENST00000566600 ZNF609O15014 1411 aa32.27■■■□□ 2.76
NME3-209ENST00000566600 SASH1O94885 1247 aa32.27■■■□□ 2.76
NME3-209ENST00000566600 AGBL3Q8NEM8 1001 aa32.27■■■□□ 2.76
NME3-209ENST00000566600 TDRD7Q8NHU6 1098 aaKnown RBP32.27■■■□□ 2.76
NME3-209ENST00000566600 FBXW7Q969H0 707 aa32.27■■■□□ 2.76
NME3-209ENST00000566600 TAF1DQ9H5J8 278 aaPredicted RBP32.27■■■□□ 2.76
NME3-209ENST00000566600 MYO3BQ8WXR4 1341 aa32.26■■■□□ 2.76
NME3-209ENST00000566600 EPHX2P34913 555 aa32.26■■■□□ 2.75
NME3-209ENST00000566600 GTF2IP78347 998 aa32.26■■■□□ 2.75
NME3-209ENST00000566600 DACT2Q5SW24 774 aa32.26■■■□□ 2.75
NME3-209ENST00000566600 GPR108Q9NPR9 543 aa32.26■■■□□ 2.75
NME3-209ENST00000566600 ZBTB12Q9Y330 459 aaPredicted RBP32.26■■■□□ 2.75
NME3-209ENST00000566600 PNMA8AQ86V59 439 aaPredicted RBP32.25■■■□□ 2.75
NME3-209ENST00000566600 A0A1B0GUL7 405 aa32.24■■■□□ 2.75
NME3-209ENST00000566600 TOMM70O94826 608 aa32.24■■■□□ 2.75
NME3-209ENST00000566600 BCAMP50895 628 aa32.24■■■□□ 2.75
NME3-209ENST00000566600 GNL3LQ9NVN8 582 aaKnown RBP32.24■■■□□ 2.75
NME3-209ENST00000566600 CNOT7Q9UIV1 285 aaKnown RBP32.24■■■□□ 2.75
NME3-209ENST00000566600 EXOC6BQ9Y2D4 811 aa32.24■■■□□ 2.75
NME3-209ENST00000566600 H7C1D1 291 aa32.23■■■□□ 2.75
NME3-209ENST00000566600 FRAT2O75474 233 aaPredicted RBP32.23■■■□□ 2.75
NME3-209ENST00000566600 EPS15P42566 896 aa32.23■■■□□ 2.75
NME3-209ENST00000566600 TIMM10P62072 90 aa32.23■■■□□ 2.75
NME3-209ENST00000566600 NEUROD6Q96NK8 337 aa32.22■■■□□ 2.75
NME3-209ENST00000566600 ADARB2Q9NS39 739 aaKnown RBP32.22■■■□□ 2.75
NME3-209ENST00000566600 ARAP2Q8WZ64 1704 aa32.22■■■□□ 2.75
NME3-209ENST00000566600 FAM205AQ6ZU69 1335 aa32.22■■■□□ 2.75
NME3-209ENST00000566600 FKBP1AP62942 108 aaKnown RBP32.21■■■□□ 2.75
NME3-209ENST00000566600 MICALL2Q8IY33 904 aa32.21■■■□□ 2.75
NME3-209ENST00000566600 GMLQ99445 158 aa32.21■■■□□ 2.75
NME3-209ENST00000566600 RAB11FIP3O75154 756 aa32.2■■■□□ 2.75
NME3-209ENST00000566600 MMP14P50281 582 aa32.2■■■□□ 2.75
NME3-209ENST00000566600 USP50Q70EL3 339 aaPredicted RBP32.2■■■□□ 2.75
NME3-209ENST00000566600 RBM46Q8TBY0 533 aaKnown RBP32.2■■■□□ 2.75
NME3-209ENST00000566600 XAGE2Q96GT9 111 aa32.2■■■□□ 2.75
NME3-209ENST00000566600 TNNI3KQ59H18 835 aa32.19■■■□□ 2.74
NME3-209ENST00000566600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.19■■■□□ 2.74
NME3-209ENST00000566600 FPGT-TNNI3KV9GXZ4 949 aa32.19■■■□□ 2.74
NME3-209ENST00000566600 ZNF646O15015 1829 aaPredicted RBP32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms