RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 MINPP1Q9UNW1 487 aa14.23□□□□□ -0.13
KARS-207ENST00000566560 ARAP2Q8WZ64 1704 aa14.23□□□□□ -0.13
KARS-207ENST00000566560 MROH5Q6ZUA9 1318 aa14.22□□□□□ -0.13
KARS-207ENST00000566560 CHRNDQ07001 517 aa14.22□□□□□ -0.13
KARS-207ENST00000566560 OS9Q13438 667 aaPredicted RBP14.22□□□□□ -0.13
KARS-207ENST00000566560 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
KARS-207ENST00000566560 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
KARS-207ENST00000566560 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 CCDC88AQ3V6T2 1871 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.13
KARS-207ENST00000566560 IL15P40933 162 aaPredicted RBP14.21□□□□□ -0.13
KARS-207ENST00000566560 GPSM2P81274 684 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 GRIPAP1Q4V328 841 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 METTL24Q5JXM2 366 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 DPP8Q6V1X1 898 aaPredicted RBP14.21□□□□□ -0.13
KARS-207ENST00000566560 RTKN2Q8IZC4 609 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 MPNDQ8N594 471 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 ANKRD2Q9GZV1 360 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 TAOK3Q9H2K8 898 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
KARS-207ENST00000566560 TRPC6Q9Y210 931 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 EXOC6BQ9Y2D4 811 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 RIPOR2Q9Y4F9 1068 aa14.21□□□□□ -0.13
KARS-207ENST00000566560 NFKBIEO00221 500 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 UFL1O94874 794 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 KCNJ4P48050 445 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 RASSF7Q02833 373 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 G3BP1Q13283 466 aaKnown RBP eCLIP14.2□□□□□ -0.146e-7■■■□□ 17.9
KARS-207ENST00000566560 ATG9AQ7Z3C6 839 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 GGA1Q9UJY5 639 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 NOP58Q9Y2X3 529 aaKnown RBP14.2□□□□□ -0.14
KARS-207ENST00000566560 SBF1O95248 1867 aa14.2□□□□□ -0.14
KARS-207ENST00000566560 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 ZNF609O15014 1411 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 GRIN3BO60391 1043 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 TAF5LO75529 589 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 TIE1P35590 1138 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 FKBP4Q02790 459 aaKnown RBP eCLIP14.19□□□□□ -0.14
KARS-207ENST00000566560 HDAC1Q13547 482 aaPredicted RBP14.19□□□□□ -0.14
KARS-207ENST00000566560 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 VGLL2Q8N8G2 317 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 HELBQ8NG08 1087 aaPredicted RBP14.19□□□□□ -0.14
KARS-207ENST00000566560 PSMD1Q99460 953 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
KARS-207ENST00000566560 DICER1Q9UPY3 1922 aaKnown RBP14.19□□□□□ -0.14
KARS-207ENST00000566560 GABBR2O75899 941 aa14.18□□□□□ -0.14
KARS-207ENST00000566560 ATP2B4P23634 1241 aa14.18□□□□□ -0.14
KARS-207ENST00000566560 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
KARS-207ENST00000566560 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
KARS-207ENST00000566560 ZNF804BA4D1E1 1349 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 GOLGB1Q14789 3259 aaKnown RBP14.17□□□□□ -0.14
KARS-207ENST00000566560 C6orf229H3BNL8 230 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 APBB1O00213 710 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 PDE8BO95263 885 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 TFCP2Q12800 502 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 PUM3Q15397 648 aaKnown RBP14.17□□□□□ -0.14
KARS-207ENST00000566560 TBC1D16Q8TBP0 767 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 GPR101Q96P66 508 aaPredicted RBP14.17□□□□□ -0.14
KARS-207ENST00000566560 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 RTFDC1Q9BY42 306 aaPredicted RBP14.17□□□□□ -0.14
KARS-207ENST00000566560 CEP126Q9P2H0 1117 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 LEMD3Q9Y2U8 911 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 MED23Q9ULK4 1368 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 MYH13Q9UKX3 1938 aa14.17□□□□□ -0.14
KARS-207ENST00000566560 ATP2B3Q16720 1220 aa14.16□□□□□ -0.14
KARS-207ENST00000566560 EYA3Q99504 573 aa14.16□□□□□ -0.14
KARS-207ENST00000566560 RWDD1Q9H446 243 aaPredicted RBP14.16□□□□□ -0.14
KARS-207ENST00000566560 ZNF277Q9NRM2 450 aaPredicted RBP14.16□□□□□ -0.14
KARS-207ENST00000566560 POLLQ9UGP5 575 aa14.16□□□□□ -0.14
KARS-207ENST00000566560 CHD4Q14839 1912 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 COL4A5P29400 1685 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 SNAP23O00161 211 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 PPIP5K2O43314 1243 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 RAB11FIP3O75154 756 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 SASH1O94885 1247 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 SLC5A1P13866 664 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 KLRK1P26718 216 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 IARSP41252 1262 aaKnown RBP14.15□□□□□ -0.14
KARS-207ENST00000566560 AOC3Q16853 763 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 DCTPP1Q9H773 170 aa14.15□□□□□ -0.14
KARS-207ENST00000566560 WTIPA6NIX2 430 aaPredicted RBP14.14□□□□□ -0.15
KARS-207ENST00000566560 UBE4AQ14139 1066 aa14.14□□□□□ -0.15
KARS-207ENST00000566560 WASHC4Q2M389 1173 aa14.14□□□□□ -0.15
KARS-207ENST00000566560 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
KARS-207ENST00000566560 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
KARS-207ENST00000566560 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
KARS-207ENST00000566560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.14□□□□□ -0.15
KARS-207ENST00000566560 PSME4Q14997 1843 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 A0A1B0GUL7 405 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 IGHDP01880 384 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 IFIT1P09914 478 aaKnown RBP14.13□□□□□ -0.15
KARS-207ENST00000566560 LMNB1P20700 586 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 FGFR2P21802 821 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 PRELPP51888 382 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 KIAA2012Q0VF49 1180 aa14.13□□□□□ -0.15
KARS-207ENST00000566560 TNNI3KQ59H18 835 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms