RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 GRAPLQ8TC17 118 aaPredicted RBP23.28■■□□□ 1.32
PKD1-230ENST00000565639 QSER1Q2KHR3 1735 aa23.28■■□□□ 1.32
PKD1-230ENST00000565639 TBC1D2Q9BYX2 928 aa23.27■■□□□ 1.32
PKD1-230ENST00000565639 HSPA4P34932 840 aa23.27■■□□□ 1.32
PKD1-230ENST00000565639 ZAP70P43403 619 aa23.27■■□□□ 1.32
PKD1-230ENST00000565639 RPGRQ92834 1020 aaKnown RBP23.27■■□□□ 1.32
PKD1-230ENST00000565639 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
PKD1-230ENST00000565639 SNAP23O00161 211 aa23.26■■□□□ 1.31
PKD1-230ENST00000565639 ANTXR1Q9H6X2 564 aa23.26■■□□□ 1.31
PKD1-230ENST00000565639 TTF1Q15361 905 aaPredicted RBP23.25■■□□□ 1.31
PKD1-230ENST00000565639 CCDC171Q6TFL3 1326 aa23.25■■□□□ 1.31
PKD1-230ENST00000565639 ZFYP08048 801 aaPredicted RBP23.25■■□□□ 1.31
PKD1-230ENST00000565639 HOXA10P31260 410 aaPredicted RBP23.25■■□□□ 1.31
PKD1-230ENST00000565639 HELLSQ9NRZ9 838 aa23.25■■□□□ 1.31
PKD1-230ENST00000565639 RNF113AO15541 343 aaKnown RBP23.24■■□□□ 1.31
PKD1-230ENST00000565639 SLC4A3P48751 1232 aa23.24■■□□□ 1.31
PKD1-230ENST00000565639 MCMDC2Q4G0Z9 681 aa23.24■■□□□ 1.31
PKD1-230ENST00000565639 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
PKD1-230ENST00000565639 ZMYM1Q5SVZ6 1142 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 BRIP1Q9BX63 1249 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 PARP3Q9Y6F1 533 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 MMP10P09238 476 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 PI16Q6UXB8 463 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 HSCBQ8IWL3 235 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 MAP4K1Q92918 833 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 ZNF804BA4D1E1 1349 aa23.23■■□□□ 1.31
PKD1-230ENST00000565639 PTH1RQ03431 593 aa23.22■■□□□ 1.31
PKD1-230ENST00000565639 CRAMP1Q96RY5 1269 aa23.22■■□□□ 1.31
PKD1-230ENST00000565639 HMG20BQ9P0W2 317 aa23.22■■□□□ 1.31
PKD1-230ENST00000565639 CYP2E1P05181 493 aaPredicted RBP23.21■■□□□ 1.31
PKD1-230ENST00000565639 BCAMP50895 628 aa23.21■■□□□ 1.31
PKD1-230ENST00000565639 SPATA5Q8NB90 893 aa23.21■■□□□ 1.31
PKD1-230ENST00000565639 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.21■■□□□ 1.311e-6■■■■□ 25
PKD1-230ENST00000565639 PALD1Q9ULE6 856 aa23.21■■□□□ 1.31
PKD1-230ENST00000565639 RASGRF1Q13972 1273 aa23.21■■□□□ 1.31
PKD1-230ENST00000565639 ZSCAN25Q6NSZ9 544 aa23.21■■□□□ 1.31
PKD1-230ENST00000565639 ZNF589Q86UQ0 364 aaPredicted RBP23.21■■□□□ 1.31
PKD1-230ENST00000565639 GNL3LQ9NVN8 582 aaKnown RBP23.21■■□□□ 1.31
PKD1-230ENST00000565639 BBOX1O75936 387 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 KCNJ4P48050 445 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 CAVIN4Q5BKX8 364 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 CCDC125Q86Z20 511 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 ANKRD31Q8N7Z5 1873 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 DEFB132Q7Z7B7 95 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 KCNB2Q92953 911 aa23.2■■□□□ 1.3
PKD1-230ENST00000565639 MYH7P12883 1935 aa23.19■■□□□ 1.3
PKD1-230ENST00000565639 CHGBP05060 677 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 TMC4Q7Z404 712 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 SEC62Q99442 399 aaKnown RBP23.18■■□□□ 1.3
PKD1-230ENST00000565639 LEMD3Q9Y2U8 911 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 ZBTB22O15209 634 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 PDE6BP35913 854 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 FBXO33Q7Z6M2 555 aa23.18■■□□□ 1.3
PKD1-230ENST00000565639 FAM84BQ96KN1 310 aaPredicted RBP23.18■■□□□ 1.3
PKD1-230ENST00000565639 PIH1D3Q9NQM4 214 aaKnown RBP23.18■■□□□ 1.3
PKD1-230ENST00000565639 RBM8AQ9Y5S9 174 aaKnown RBP23.18■■□□□ 1.3
PKD1-230ENST00000565639 XDHP47989 1333 aa23.17■■□□□ 1.3
PKD1-230ENST00000565639 ST18O60284 1047 aa23.17■■□□□ 1.3
PKD1-230ENST00000565639 MSL1Q68DK7 614 aa23.17■■□□□ 1.3
PKD1-230ENST00000565639 SNX14Q9Y5W7 946 aa23.17■■□□□ 1.3
PKD1-230ENST00000565639 GYG1P46976 350 aa23.16■■□□□ 1.3
PKD1-230ENST00000565639 APPBP2Q92624 585 aa23.16■■□□□ 1.3
PKD1-230ENST00000565639 MAST3O60307 1309 aa23.16■■□□□ 1.3
PKD1-230ENST00000565639 WTIPA6NIX2 430 aaPredicted RBP23.16■■□□□ 1.3
PKD1-230ENST00000565639 SEMA3EO15041 775 aa23.16■■□□□ 1.3
PKD1-230ENST00000565639 UBE3CQ15386 1083 aa23.16■■□□□ 1.3
PKD1-230ENST00000565639 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
PKD1-230ENST00000565639 DOCK2Q92608 1830 aa23.15■■□□□ 1.3
PKD1-230ENST00000565639 ADD2P35612 726 aa23.15■■□□□ 1.3
PKD1-230ENST00000565639 ANKIB1Q9P2G1 1089 aa23.15■■□□□ 1.3
PKD1-230ENST00000565639 CD2BP2O95400 341 aaKnown RBP23.14■■□□□ 1.3
PKD1-230ENST00000565639 SRGNP10124 158 aa23.14■■□□□ 1.3
PKD1-230ENST00000565639 NPR1P16066 1061 aa23.14■■□□□ 1.3
PKD1-230ENST00000565639 RNF20Q5VTR2 975 aa23.14■■□□□ 1.3
PKD1-230ENST00000565639 PRPF40BQ6NWY9 871 aaKnown RBP23.14■■□□□ 1.3
PKD1-230ENST00000565639 CCDC129Q6ZRS4 1044 aa23.14■■□□□ 1.3
PKD1-230ENST00000565639 OSBP2Q969R2 916 aa23.14■■□□□ 1.3
PKD1-230ENST00000565639 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.3
PKD1-230ENST00000565639 PDS5AQ29RF7 1337 aaKnown RBP23.14■■□□□ 1.29
PKD1-230ENST00000565639 IRS2Q9Y4H2 1338 aa23.14■■□□□ 1.29
PKD1-230ENST00000565639 K7ELQ4 463 aaPredicted RBP23.14■■□□□ 1.29
PKD1-230ENST00000565639 IDH1O75874 414 aaKnown RBP23.14■■□□□ 1.29
PKD1-230ENST00000565639 ZKSCAN1P17029 563 aaPredicted RBP23.14■■□□□ 1.29
PKD1-230ENST00000565639 WASHC4Q2M389 1173 aa23.14■■□□□ 1.29
PKD1-230ENST00000565639 SLFNL1Q499Z3 407 aa23.14■■□□□ 1.29
PKD1-230ENST00000565639 SLC9C2Q5TAH2 1124 aa23.14■■□□□ 1.29
PKD1-230ENST00000565639 RASEFQ8IZ41 740 aa23.14■■□□□ 1.29
PKD1-230ENST00000565639 DENND2AQ9ULE3 1009 aa23.14■■□□□ 1.29
PKD1-230ENST00000565639 U3KPZ7 1027 aaPredicted RBP23.14■■□□□ 1.29
PKD1-230ENST00000565639 HIBADHP31937 336 aaKnown RBP23.13■■□□□ 1.29
PKD1-230ENST00000565639 MAP3K12Q12852 859 aa23.13■■□□□ 1.29
PKD1-230ENST00000565639 CREB3L3Q68CJ9 461 aa23.13■■□□□ 1.29
PKD1-230ENST00000565639 C15orf52Q6ZUT6 534 aaKnown RBP23.13■■□□□ 1.29
PKD1-230ENST00000565639 NEK4P51957 841 aa23.12■■□□□ 1.29
PKD1-230ENST00000565639 M0R2C6 588 aa23.12■■□□□ 1.29
PKD1-230ENST00000565639 ALDH1B1P30837 517 aa23.12■■□□□ 1.29
PKD1-230ENST00000565639 TM6SF1Q9BZW5 370 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms