RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 PI4KAP2A4QPH2 592 aa24.09■■□□□ 1.45
NME3-207ENST00000564628 SLC10A3P09131 477 aa24.09■■□□□ 1.45
NME3-207ENST00000564628 ATP2B4P23634 1241 aa24.09■■□□□ 1.45
NME3-207ENST00000564628 ANGEL2Q5VTE6 544 aaKnown RBP24.09■■□□□ 1.45
NME3-207ENST00000564628 PI4KAP1Q8N8J0 262 aa24.09■■□□□ 1.45
NME3-207ENST00000564628 PITPNM2Q9BZ72 1349 aa24.09■■□□□ 1.45
NME3-207ENST00000564628 USP17L8P0C7I0 530 aa24.08■■□□□ 1.45
NME3-207ENST00000564628 FKBP1BP68106 108 aa24.08■■□□□ 1.45
NME3-207ENST00000564628 SCARF1Q14162 830 aa24.08■■□□□ 1.45
NME3-207ENST00000564628 REM2Q8IYK8 340 aaPredicted RBP24.08■■□□□ 1.45
NME3-207ENST00000564628 CCDC85AQ96PX6 553 aaPredicted RBP24.08■■□□□ 1.45
NME3-207ENST00000564628 JARID2Q92833 1246 aaPredicted RBP24.07■■□□□ 1.44
NME3-207ENST00000564628 CDC5LQ99459 802 aaKnown RBP24.07■■□□□ 1.44
NME3-207ENST00000564628 RNF186Q9NXI6 227 aa24.07■■□□□ 1.44
NME3-207ENST00000564628 USP17L3A6NCW0 530 aa24.06■■□□□ 1.44
NME3-207ENST00000564628 USP17L4A6NCW7 530 aa24.06■■□□□ 1.44
NME3-207ENST00000564628 SLC34A2O95436 690 aa24.06■■□□□ 1.44
NME3-207ENST00000564628 CTSWP56202 376 aa24.06■■□□□ 1.44
NME3-207ENST00000564628 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
NME3-207ENST00000564628 USP17L1Q7RTZ2 530 aa24.06■■□□□ 1.44
NME3-207ENST00000564628 MYOZ2Q9NPC6 264 aa24.06■■□□□ 1.44
NME3-207ENST00000564628 TRPA1O75762 1119 aa24.05■■□□□ 1.44
NME3-207ENST00000564628 CSRNP1Q96S65 589 aa24.05■■□□□ 1.44
NME3-207ENST00000564628 PAPPA2Q9BXP8 1791 aa24.05■■□□□ 1.44
NME3-207ENST00000564628 MED23Q9ULK4 1368 aa24.04■■□□□ 1.44
NME3-207ENST00000564628 AKAP11Q9UKA4 1901 aa24.04■■□□□ 1.44
NME3-207ENST00000564628 IGKV5-2P06315 115 aa24.04■■□□□ 1.44
NME3-207ENST00000564628 CT47B1P0C2W7 299 aaPredicted RBP24.04■■□□□ 1.44
NME3-207ENST00000564628 FKBP5Q13451 457 aaPredicted RBP24.04■■□□□ 1.44
NME3-207ENST00000564628 BSDC1Q9NW68 430 aaPredicted RBP24.04■■□□□ 1.44
NME3-207ENST00000564628 RASAL3Q86YV0 1011 aa24.03■■□□□ 1.44
NME3-207ENST00000564628 TTLL11Q8NHH1 800 aa24.03■■□□□ 1.44
NME3-207ENST00000564628 MYH3P11055 1940 aa24.02■■□□□ 1.44
NME3-207ENST00000564628 DNAAF4Q8WXU2 420 aa24.02■■□□□ 1.44
NME3-207ENST00000564628 MINPP1Q9UNW1 487 aa24.02■■□□□ 1.44
NME3-207ENST00000564628 NEXNQ0ZGT2 675 aa24.01■■□□□ 1.43
NME3-207ENST00000564628 MRPL50Q8N5N7 158 aaKnown RBP24.01■■□□□ 1.43
NME3-207ENST00000564628 SSH1Q8WYL5 1049 aa24.01■■□□□ 1.43
NME3-207ENST00000564628 ZBED9Q6R2W3 1325 aa24.01■■□□□ 1.43
NME3-207ENST00000564628 NEURL1BA8MQ27 555 aa24■■□□□ 1.43
NME3-207ENST00000564628 GREM2Q9H772 168 aa24■■□□□ 1.43
NME3-207ENST00000564628 MYO3BQ8WXR4 1341 aa24■■□□□ 1.43
NME3-207ENST00000564628 MMP14P50281 582 aa23.99■■□□□ 1.43
NME3-207ENST00000564628 CCT4P50991 539 aaKnown RBP23.99■■□□□ 1.43
NME3-207ENST00000564628 CWF19L2Q2TBE0 894 aaKnown RBP23.99■■□□□ 1.43
NME3-207ENST00000564628 ALDH1L2Q3SY69 923 aa23.99■■□□□ 1.43
NME3-207ENST00000564628 DACT2Q5SW24 774 aa23.99■■□□□ 1.43
NME3-207ENST00000564628 OGFOD1Q8N543 542 aa23.99■■□□□ 1.43
NME3-207ENST00000564628 WTIPA6NIX2 430 aaPredicted RBP23.98■■□□□ 1.43
NME3-207ENST00000564628 STRIP1Q5VSL9 837 aa23.98■■□□□ 1.43
NME3-207ENST00000564628 LINS1Q8NG48 757 aa23.98■■□□□ 1.43
NME3-207ENST00000564628 COA1Q9GZY4 146 aa23.98■■□□□ 1.43
NME3-207ENST00000564628 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
NME3-207ENST00000564628 NBPF9Q3BBW0 867 aa23.97■■□□□ 1.43
NME3-207ENST00000564628 LEMD3Q9Y2U8 911 aa23.97■■□□□ 1.43
NME3-207ENST00000564628 SPEF2Q9C093 1822 aa23.96■■□□□ 1.43
NME3-207ENST00000564628 F6X3S4 739 aa23.96■■□□□ 1.43
NME3-207ENST00000564628 H7C1W4 665 aa23.96■■□□□ 1.43
NME3-207ENST00000564628 CTU1Q7Z7A3 348 aaKnown RBP23.96■■□□□ 1.43
NME3-207ENST00000564628 PTPRCP08575 1304 aa23.95■■□□□ 1.42
NME3-207ENST00000564628 WNT10BO00744 389 aa23.95■■□□□ 1.42
NME3-207ENST00000564628 IGHMBP2P38935 993 aaKnown RBP23.95■■□□□ 1.42
NME3-207ENST00000564628 GCKRQ14397 625 aa23.95■■□□□ 1.42
NME3-207ENST00000564628 BEND3Q5T5X7 828 aa23.95■■□□□ 1.42
NME3-207ENST00000564628 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
NME3-207ENST00000564628 PLA2G12BQ9BX93 195 aa23.95■■□□□ 1.42
NME3-207ENST00000564628 UBE2Q2LH0YL09 131 aa23.93■■□□□ 1.42
NME3-207ENST00000564628 MOB2Q70IA6 237 aa23.93■■□□□ 1.42
NME3-207ENST00000564628 MXD3Q9BW11 206 aa23.93■■□□□ 1.42
NME3-207ENST00000564628 ANKRD2Q9GZV1 360 aa23.93■■□□□ 1.42
NME3-207ENST00000564628 SCAF8Q9UPN6 1271 aaKnown RBP23.93■■□□□ 1.42
NME3-207ENST00000564628 ZNF804BA4D1E1 1349 aa23.92■■□□□ 1.42
NME3-207ENST00000564628 NF2P35240 595 aa23.92■■□□□ 1.42
NME3-207ENST00000564628 CASP7P55210 303 aa23.92■■□□□ 1.42
NME3-207ENST00000564628 TXNRD3Q86VQ6 643 aa23.92■■□□□ 1.42
NME3-207ENST00000564628 SMC4Q9NTJ3 1288 aa23.92■■□□□ 1.42
NME3-207ENST00000564628 TNRC18O15417 2968 aaPredicted RBP23.91■■□□□ 1.42
NME3-207ENST00000564628 PRAMEF18Q5VWM3 479 aa23.91■■□□□ 1.42
NME3-207ENST00000564628 FBXW7Q969H0 707 aa23.91■■□□□ 1.42
NME3-207ENST00000564628 ITGA6P23229 1130 aa23.9■■□□□ 1.42
NME3-207ENST00000564628 TM4SF4P48230 202 aa23.9■■□□□ 1.42
NME3-207ENST00000564628 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
NME3-207ENST00000564628 TTLL12Q14166 644 aaPredicted RBP23.9■■□□□ 1.42
NME3-207ENST00000564628 PKN2Q16513 984 aaKnown RBP23.9■■□□□ 1.42
NME3-207ENST00000564628 NOM1Q5C9Z4 860 aaKnown RBP23.9■■□□□ 1.42
NME3-207ENST00000564628 TTLL5Q6EMB2 1281 aa23.9■■□□□ 1.42
NME3-207ENST00000564628 CSF1RP07333 972 aa23.89■■□□□ 1.41
NME3-207ENST00000564628 SOX10P56693 466 aa23.89■■□□□ 1.41
NME3-207ENST00000564628 APOBEC3FQ8IUX4 373 aaKnown RBP23.89■■□□□ 1.41
NME3-207ENST00000564628 MPHOSPH8Q99549 860 aa23.89■■□□□ 1.41
NME3-207ENST00000564628 HDAC9Q9UKV0 1011 aa23.89■■□□□ 1.41
NME3-207ENST00000564628 ALDH1L1O75891 902 aa23.88■■□□□ 1.41
NME3-207ENST00000564628 SASH1O94885 1247 aa23.88■■□□□ 1.41
NME3-207ENST00000564628 ZBED3Q96IU2 234 aaPredicted RBP23.88■■□□□ 1.41
NME3-207ENST00000564628 KLRK1P26718 216 aa23.87■■□□□ 1.41
NME3-207ENST00000564628 ZNF296Q8WUU4 475 aaPredicted RBP23.87■■□□□ 1.41
NME3-207ENST00000564628 TBC1D8O95759 1140 aa23.86■■□□□ 1.41
NME3-207ENST00000564628 SREBF2Q12772 1141 aa23.86■■□□□ 1.41
NME3-207ENST00000564628 ARMC9Q7Z3E5 817 aa23.86■■□□□ 1.41
NME3-207ENST00000564628 KIAA0825Q8IV33 1275 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms