RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 RNF186Q9NXI6 227 aa26.75■■□□□ 1.87
HERC2-204ENST00000563945 ZNF609O15014 1411 aa26.74■■□□□ 1.87
HERC2-204ENST00000563945 NEURL1BA8MQ27 555 aa26.74■■□□□ 1.87
HERC2-204ENST00000563945 UBE3BQ7Z3V4 1068 aa26.74■■□□□ 1.87
HERC2-204ENST00000563945 MED23Q9ULK4 1368 aa26.73■■□□□ 1.87
HERC2-204ENST00000563945 CSRNP1Q96S65 589 aa26.73■■□□□ 1.87
HERC2-204ENST00000563945 COA1Q9GZY4 146 aa26.73■■□□□ 1.87
HERC2-204ENST00000563945 LEMD3Q9Y2U8 911 aa26.73■■□□□ 1.87
HERC2-204ENST00000563945 MYO3BQ8WXR4 1341 aa26.72■■□□□ 1.87
HERC2-204ENST00000563945 NF2P35240 595 aa26.72■■□□□ 1.87
HERC2-204ENST00000563945 TTLL12Q14166 644 aaPredicted RBP26.72■■□□□ 1.87
HERC2-204ENST00000563945 CCDC27Q2M243 656 aa26.72■■□□□ 1.87
HERC2-204ENST00000563945 MPHOSPH8Q99549 860 aa26.72■■□□□ 1.87
HERC2-204ENST00000563945 ANKRD2Q9GZV1 360 aa26.72■■□□□ 1.87
HERC2-204ENST00000563945 H7C1W4 665 aa26.71■■□□□ 1.87
HERC2-204ENST00000563945 MYH16Q9H6N6 1097 aa26.71■■□□□ 1.87
HERC2-204ENST00000563945 KCNJ4P48050 445 aa26.7■■□□□ 1.86
HERC2-204ENST00000563945 STRIP1Q5VSL9 837 aa26.7■■□□□ 1.86
HERC2-204ENST00000563945 G2E3Q7L622 706 aa26.7■■□□□ 1.86
HERC2-204ENST00000563945 WWC1Q8IX03 1113 aa26.7■■□□□ 1.86
HERC2-204ENST00000563945 WTIPA6NIX2 430 aaPredicted RBP26.69■■□□□ 1.86
HERC2-204ENST00000563945 MMP14P50281 582 aa26.69■■□□□ 1.86
HERC2-204ENST00000563945 NBPF9Q3BBW0 867 aa26.69■■□□□ 1.86
HERC2-204ENST00000563945 DACT2Q5SW24 774 aa26.69■■□□□ 1.86
HERC2-204ENST00000563945 RASAL3Q86YV0 1011 aa26.69■■□□□ 1.86
HERC2-204ENST00000563945 HDAC9Q9UKV0 1011 aa26.69■■□□□ 1.86
HERC2-204ENST00000563945 ITGA6P23229 1130 aa26.68■■□□□ 1.86
HERC2-204ENST00000563945 FKBP5Q13451 457 aaPredicted RBP26.68■■□□□ 1.86
HERC2-204ENST00000563945 SCAF8Q9UPN6 1271 aaKnown RBP26.68■■□□□ 1.86
HERC2-204ENST00000563945 AKAP11Q9UKA4 1901 aa26.68■■□□□ 1.86
HERC2-204ENST00000563945 ZNF804BA4D1E1 1349 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 UBE2Q2LH0YL09 131 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 FLIIQ13045 1269 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 GCKRQ14397 625 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 TTLL5Q6EMB2 1281 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 MXD3Q9BW11 206 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 PSME4Q14997 1843 aa26.67■■□□□ 1.86
HERC2-204ENST00000563945 IL16Q14005 1332 aa26.66■■□□□ 1.86
HERC2-204ENST00000563945 PRAMEF18Q5VWM3 479 aa26.66■■□□□ 1.86
HERC2-204ENST00000563945 DNAAF4Q8WXU2 420 aa26.66■■□□□ 1.86
HERC2-204ENST00000563945 PLA2G12BQ9BX93 195 aa26.66■■□□□ 1.86
HERC2-204ENST00000563945 MYH3P11055 1940 aa26.66■■□□□ 1.86
HERC2-204ENST00000563945 WNT10BO00744 389 aa26.65■■□□□ 1.86
HERC2-204ENST00000563945 MOB2Q70IA6 237 aa26.65■■□□□ 1.86
HERC2-204ENST00000563945 TXNRD3Q86VQ6 643 aa26.64■■□□□ 1.86
HERC2-204ENST00000563945 LINS1Q8NG48 757 aa26.64■■□□□ 1.86
HERC2-204ENST00000563945 PAPPA2Q9BXP8 1791 aa26.63■■□□□ 1.85
HERC2-204ENST00000563945 ANKRD18BA2A2Z9 1011 aa26.63■■□□□ 1.85
HERC2-204ENST00000563945 CTU1Q7Z7A3 348 aaKnown RBP26.63■■□□□ 1.85
HERC2-204ENST00000563945 GTF2IP78347 998 aa26.62■■□□□ 1.85
HERC2-204ENST00000563945 CCDC184Q52MB2 194 aa26.62■■□□□ 1.85
HERC2-204ENST00000563945 ARMC9Q7Z3E5 817 aa26.62■■□□□ 1.85
HERC2-204ENST00000563945 APOBEC3FQ8IUX4 373 aaKnown RBP26.62■■□□□ 1.85
HERC2-204ENST00000563945 KIAA0825Q8IV33 1275 aa26.62■■□□□ 1.85
HERC2-204ENST00000563945 SPEF2Q9C093 1822 aa26.62■■□□□ 1.85
HERC2-204ENST00000563945 SASH1O94885 1247 aa26.61■■□□□ 1.85
HERC2-204ENST00000563945 CSF1RP07333 972 aa26.61■■□□□ 1.85
HERC2-204ENST00000563945 CHMP3Q9Y3E7 222 aa26.61■■□□□ 1.85
HERC2-204ENST00000563945 CHRNDQ07001 517 aa26.6■■□□□ 1.85
HERC2-204ENST00000563945 NCBP3Q53F19 620 aaKnown RBP26.6■■□□□ 1.85
HERC2-204ENST00000563945 SALL2Q9Y467 1007 aaPredicted RBP26.6■■□□□ 1.85
HERC2-204ENST00000563945 IFIT5Q13325 482 aaKnown RBP26.59■■□□□ 1.85
HERC2-204ENST00000563945 PRKG1Q13976 671 aa26.58■■□□□ 1.85
HERC2-204ENST00000563945 MRS2Q9HD23 443 aa26.58■■□□□ 1.85
HERC2-204ENST00000563945 TBC1D8O95759 1140 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 KLRK1P26718 216 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 CASP7P55210 303 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 SREBF2Q12772 1141 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 DLGAP5Q15398 846 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 CD209Q9NNX6 404 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 FANCIQ9NVI1 1328 aa26.57■■□□□ 1.84
HERC2-204ENST00000563945 MKRN3Q13064 507 aaKnown RBP26.56■■□□□ 1.84
HERC2-204ENST00000563945 TAF7LQ5H9L4 462 aa26.56■■□□□ 1.84
HERC2-204ENST00000563945 WDR63Q8IWG1 891 aa26.56■■□□□ 1.84
HERC2-204ENST00000563945 VAMP4O75379 141 aa26.55■■□□□ 1.84
HERC2-204ENST00000563945 TM4SF4P48230 202 aa26.55■■□□□ 1.84
HERC2-204ENST00000563945 SOX10P56693 466 aa26.55■■□□□ 1.84
HERC2-204ENST00000563945 PKN2Q16513 984 aaKnown RBP26.55■■□□□ 1.84
HERC2-204ENST00000563945 ZNF804AQ7Z570 1209 aa26.55■■□□□ 1.84
HERC2-204ENST00000563945 HELBQ8NG08 1087 aaPredicted RBP26.55■■□□□ 1.84
HERC2-204ENST00000563945 MYO1BO43795 1136 aa26.54■■□□□ 1.84
HERC2-204ENST00000563945 TAF5LO75529 589 aa26.54■■□□□ 1.84
HERC2-204ENST00000563945 EXOSC9Q06265 439 aaKnown RBP26.54■■□□□ 1.84
HERC2-204ENST00000563945 ANGEL1Q9UNK9 670 aaKnown RBP26.54■■□□□ 1.84
HERC2-204ENST00000563945 PTPN12Q05209 780 aaKnown RBP26.53■■□□□ 1.84
HERC2-204ENST00000563945 CCDC57Q2TAC2 916 aa26.53■■□□□ 1.84
HERC2-204ENST00000563945 ANP32CO43423 234 aa26.52■■□□□ 1.84
HERC2-204ENST00000563945 ZNF296Q8WUU4 475 aaPredicted RBP26.52■■□□□ 1.84
HERC2-204ENST00000563945 SLC10A4Q96EP9 437 aa26.52■■□□□ 1.84
HERC2-204ENST00000563945 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.52■■□□□ 1.84
HERC2-204ENST00000563945 PLIN1O60240 522 aa26.51■■□□□ 1.83
HERC2-204ENST00000563945 C15orf52Q6ZUT6 534 aaKnown RBP26.51■■□□□ 1.83
HERC2-204ENST00000563945 DEFB129Q9H1M3 183 aa26.51■■□□□ 1.83
HERC2-204ENST00000563945 CACNA1FO60840 1977 aa26.51■■□□□ 1.83
HERC2-204ENST00000563945 F6X3S4 739 aa26.5■■□□□ 1.83
HERC2-204ENST00000563945 F8W031 263 aaPredicted RBP26.5■■□□□ 1.83
HERC2-204ENST00000563945 SNAP23O00161 211 aa26.5■■□□□ 1.83
HERC2-204ENST00000563945 PPP1R12BO60237 982 aaPredicted RBP26.5■■□□□ 1.83
HERC2-204ENST00000563945 FOXO4P98177 505 aa26.5■■□□□ 1.83
HERC2-204ENST00000563945 LMBR1LQ6UX01 489 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms