RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 DZANK1Q9NVP4 752 aa8.71□□□□□ -1.02
LINC00254-201ENST00000563416 RB1CC1Q8TDY2 1594 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 CDC27P30260 824 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 ORC1Q13415 861 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 SND1Q7KZF4 910 aaKnown RBP eCLIP8.7□□□□□ -1.02
LINC00254-201ENST00000563416 MAP4K3Q8IVH8 894 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 FMR1NBQ8N0W7 255 aaPredicted RBP8.7□□□□□ -1.02
LINC00254-201ENST00000563416 TMEM102Q8N9M5 508 aaPredicted RBP8.7□□□□□ -1.02
LINC00254-201ENST00000563416 LACRTQ9GZZ8 138 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
LINC00254-201ENST00000563416 NACADO15069 1562 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 KRBA1A5PL33 1030 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 PDE2AO00408 941 aaPredicted RBP8.69□□□□□ -1.02
LINC00254-201ENST00000563416 IGHA2P01877 340 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 CABP4P57796 275 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 FAM117BQ6P1L5 589 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 GALNT12Q8IXK2 581 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
LINC00254-201ENST00000563416 ZKSCAN3Q9BRR0 538 aa8.69□□□□□ -1.02
LINC00254-201ENST00000563416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.69□□□□□ -1.02
LINC00254-201ENST00000563416 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
LINC00254-201ENST00000563416 ACPPP15309 386 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 BAG6P46379 1132 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 PLCB3Q01970 1234 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 PLA2G4EQ3MJ16 856 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 ILDR2Q71H61 639 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 CSRNP1Q96S65 589 aa8.68□□□□□ -1.02
LINC00254-201ENST00000563416 NFKBIEO00221 500 aa8.67□□□□□ -1.02
LINC00254-201ENST00000563416 TREHO43280 583 aa8.67□□□□□ -1.02
LINC00254-201ENST00000563416 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
LINC00254-201ENST00000563416 FBXO11Q86XK2 927 aa8.67□□□□□ -1.02
LINC00254-201ENST00000563416 ADAM19Q9H013 955 aa8.67□□□□□ -1.02
LINC00254-201ENST00000563416 MYO15BQ96JP2 1530 aa8.66□□□□□ -1.02
LINC00254-201ENST00000563416 C9orf172C9J069 976 aa8.66□□□□□ -1.02
LINC00254-201ENST00000563416 IGHA1P01876 353 aa8.66□□□□□ -1.02
LINC00254-201ENST00000563416 GRIK4Q16099 956 aa8.66□□□□□ -1.02
LINC00254-201ENST00000563416 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
LINC00254-201ENST00000563416 NXPE3Q969Y0 559 aa8.66□□□□□ -1.02
LINC00254-201ENST00000563416 UNC13AQ9UPW8 1703 aa8.66□□□□□ -1.02
LINC00254-201ENST00000563416 ZCCHC6Q5VYS8 1495 aaKnown RBP8.65□□□□□ -1.02
LINC00254-201ENST00000563416 TRPA1O75762 1119 aa8.65□□□□□ -1.02
LINC00254-201ENST00000563416 NRG1Q02297 640 aaPredicted RBP8.65□□□□□ -1.02
LINC00254-201ENST00000563416 USPL1Q5W0Q7 1092 aa8.65□□□□□ -1.02
LINC00254-201ENST00000563416 BSNDQ8WZ55 320 aa8.65□□□□□ -1.02
LINC00254-201ENST00000563416 CCDC74AQ96AQ1 378 aa8.65□□□□□ -1.02
LINC00254-201ENST00000563416 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
LINC00254-201ENST00000563416 NPHS2Q9NP85 383 aa8.65□□□□□ -1.02
LINC00254-201ENST00000563416 LATS2Q9NRM7 1088 aa8.65□□□□□ -1.02
LINC00254-201ENST00000563416 A0A1W2PP55 124 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 H3BRJ5 948 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 LINC01387J3KSC0 135 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 DSC3Q14574 896 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 GPAT2Q6NUI2 795 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 ASAP3Q8TDY4 903 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 HHIPQ96QV1 700 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 LIN7BQ9HAP6 207 aa8.64□□□□□ -1.03
LINC00254-201ENST00000563416 C1QTNF9BB2RNN3 333 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 EPHA1P21709 976 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 SETDB1Q15047 1291 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 KIAA0319Q5VV43 1072 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 IGF2-ASQ6U949 168 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 CD163Q86VB7 1156 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 WNT8BQ93098 351 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 LENG1Q96BZ8 264 aaPredicted RBP8.63□□□□□ -1.03
LINC00254-201ENST00000563416 EHD4Q9H223 541 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
LINC00254-201ENST00000563416 NLRP2Q9NX02 1062 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 USP21Q9UK80 565 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 DCAF1Q9Y4B6 1507 aa8.63□□□□□ -1.03
LINC00254-201ENST00000563416 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 MSTNO14793 375 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 GADD45BO75293 160 aaPredicted RBP8.62□□□□□ -1.03
LINC00254-201ENST00000563416 DEAF1O75398 565 aaPredicted RBP8.62□□□□□ -1.03
LINC00254-201ENST00000563416 CDC25BP30305 580 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 CHRNA4P43681 627 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 MAPK8P45983 427 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 ARL4DP49703 201 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 CCNJLQ8IV13 435 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 GZF1Q9H116 711 aaPredicted RBP8.62□□□□□ -1.03
LINC00254-201ENST00000563416 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
LINC00254-201ENST00000563416 DLL1O00548 723 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 FSCN2O14926 492 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 SELPP16109 830 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00254-201ENST00000563416 ENOX2Q16206 610 aaKnown RBP8.61□□□□□ -1.03
LINC00254-201ENST00000563416 TXNDC11Q6PKC3 985 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 SEC31BQ9NQW1 1179 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 TRAK1Q9UPV9 953 aa8.61□□□□□ -1.03
LINC00254-201ENST00000563416 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
LINC00254-201ENST00000563416 ADAMTSL4Q6UY14 1074 aa8.6□□□□□ -1.03
LINC00254-201ENST00000563416 OSGEPQ9NPF4 335 aa8.6□□□□□ -1.03
LINC00254-201ENST00000563416 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
LINC00254-201ENST00000563416 A0A096LPE4 126 aa8.59□□□□□ -1.03
LINC00254-201ENST00000563416 A0A1W2PPZ6 126 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms