RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 GLIS2Q9BZE0 524 aaPredicted RBP22.41■■□□□ 1.18
CMTM3-204ENST00000562357 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
CMTM3-204ENST00000562357 TAF5LO75529 589 aa22.4■■□□□ 1.18
CMTM3-204ENST00000562357 USP17L8P0C7I0 530 aa22.4■■□□□ 1.18
CMTM3-204ENST00000562357 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
CMTM3-204ENST00000562357 HELBQ8NG08 1087 aaPredicted RBP22.4■■□□□ 1.18
CMTM3-204ENST00000562357 BICC1Q9H694 974 aaKnown RBP22.4■■□□□ 1.18
CMTM3-204ENST00000562357 NOB1Q9ULX3 412 aaKnown RBP22.4■■□□□ 1.18
CMTM3-204ENST00000562357 PLIN1O60240 522 aa22.39■■□□□ 1.17
CMTM3-204ENST00000562357 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.17
CMTM3-204ENST00000562357 STRIP1Q5VSL9 837 aa22.39■■□□□ 1.17
CMTM3-204ENST00000562357 ZNF804AQ7Z570 1209 aa22.39■■□□□ 1.17
CMTM3-204ENST00000562357 OGFOD1Q8N543 542 aa22.39■■□□□ 1.17
CMTM3-204ENST00000562357 SCN9AQ15858 1988 aa22.38■■□□□ 1.17
CMTM3-204ENST00000562357 RASSF10A6NK89 507 aa22.38■■□□□ 1.17
CMTM3-204ENST00000562357 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
CMTM3-204ENST00000562357 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-204ENST00000562357 RABL6Q3YEC7 729 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-204ENST00000562357 PAXIP1Q6ZW49 1069 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-204ENST00000562357 KRT26Q7Z3Y9 468 aa22.38■■□□□ 1.17
CMTM3-204ENST00000562357 TXNRD3Q86VQ6 643 aa22.38■■□□□ 1.17
CMTM3-204ENST00000562357 ZNF408Q9H9D4 720 aa22.38■■□□□ 1.17
CMTM3-204ENST00000562357 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
CMTM3-204ENST00000562357 KLRK1P26718 216 aa22.37■■□□□ 1.17
CMTM3-204ENST00000562357 RARSP54136 660 aaKnown RBP22.37■■□□□ 1.17
CMTM3-204ENST00000562357 ZNF280AP59817 542 aaPredicted RBP22.37■■□□□ 1.17
CMTM3-204ENST00000562357 FMR1Q06787 632 aaKnown RBP eCLIP22.37■■□□□ 1.17
CMTM3-204ENST00000562357 TTLL5Q6EMB2 1281 aa22.37■■□□□ 1.17
CMTM3-204ENST00000562357 SULF1Q8IWU6 871 aa22.37■■□□□ 1.17
CMTM3-204ENST00000562357 KAZALD1Q96I82 304 aa22.37■■□□□ 1.17
CMTM3-204ENST00000562357 USP44Q9H0E7 712 aa22.37■■□□□ 1.17
CMTM3-204ENST00000562357 EGFRP00533 1210 aa22.36■■□□□ 1.17
CMTM3-204ENST00000562357 DACT2Q5SW24 774 aa22.36■■□□□ 1.17
CMTM3-204ENST00000562357 C15orf52Q6ZUT6 534 aaKnown RBP22.36■■□□□ 1.17
CMTM3-204ENST00000562357 USP48Q86UV5 1035 aa22.36■■□□□ 1.17
CMTM3-204ENST00000562357 MYOZ2Q9NPC6 264 aa22.36■■□□□ 1.17
CMTM3-204ENST00000562357 MROH5Q6ZUA9 1318 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 UBTFL1P0CB47 393 aaPredicted RBP22.35■■□□□ 1.17
CMTM3-204ENST00000562357 HSPA1AP0DMV8 641 aaKnown RBP22.35■■□□□ 1.17
CMTM3-204ENST00000562357 HSPA1BP0DMV9 641 aaKnown RBP22.35■■□□□ 1.17
CMTM3-204ENST00000562357 ECE1P42892 770 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 VEGFBP49765 207 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 MMP14P50281 582 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 GMLQ99445 158 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 CD209Q9NNX6 404 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 GGA3Q9NZ52 723 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 HDAC9Q9UKV0 1011 aa22.35■■□□□ 1.17
CMTM3-204ENST00000562357 IPO8O15397 1037 aaKnown RBP22.34■■□□□ 1.17
CMTM3-204ENST00000562357 GTF2IP78347 998 aa22.34■■□□□ 1.17
CMTM3-204ENST00000562357 CST9Q5W186 159 aa22.34■■□□□ 1.17
CMTM3-204ENST00000562357 ANKRD44Q8N8A2 993 aa22.34■■□□□ 1.17
CMTM3-204ENST00000562357 PSME4Q14997 1843 aa22.34■■□□□ 1.17
CMTM3-204ENST00000562357 SNAP23O00161 211 aa22.33■■□□□ 1.17
CMTM3-204ENST00000562357 UBE4AQ14139 1066 aa22.33■■□□□ 1.17
CMTM3-204ENST00000562357 SCARF1Q14162 830 aa22.33■■□□□ 1.17
CMTM3-204ENST00000562357 ARHGAP45Q92619 1136 aa22.33■■□□□ 1.17
CMTM3-204ENST00000562357 TLL2Q9Y6L7 1015 aa22.33■■□□□ 1.17
CMTM3-204ENST00000562357 METTL24Q5JXM2 366 aa22.32■■□□□ 1.16
CMTM3-204ENST00000562357 AIDAQ96BJ3 306 aa22.32■■□□□ 1.16
CMTM3-204ENST00000562357 MXD3Q9BW11 206 aa22.32■■□□□ 1.16
CMTM3-204ENST00000562357 TRPM7Q96QT4 1865 aa22.32■■□□□ 1.16
CMTM3-204ENST00000562357 GRM1Q13255 1194 aa22.31■■□□□ 1.16
CMTM3-204ENST00000562357 ANGEL2Q5VTE6 544 aaKnown RBP22.31■■□□□ 1.16
CMTM3-204ENST00000562357 PUS3Q9BZE2 481 aaKnown RBP22.31■■□□□ 1.16
CMTM3-204ENST00000562357 WDR33Q9C0J8 1336 aaKnown RBP22.31■■□□□ 1.16
CMTM3-204ENST00000562357 ADM5C9JUS6 153 aa22.3■■□□□ 1.16
CMTM3-204ENST00000562357 IL1R1P14778 569 aa22.3■■□□□ 1.16
CMTM3-204ENST00000562357 SAPCD2Q86UD0 394 aa22.3■■□□□ 1.16
CMTM3-204ENST00000562357 KIAA0825Q8IV33 1275 aa22.3■■□□□ 1.16
CMTM3-204ENST00000562357 CAPNS2Q96L46 248 aa22.3■■□□□ 1.16
CMTM3-204ENST00000562357 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
CMTM3-204ENST00000562357 VPS37DQ86XT2 251 aa22.29■■□□□ 1.16
CMTM3-204ENST00000562357 PITPNM2Q9BZ72 1349 aa22.29■■□□□ 1.16
CMTM3-204ENST00000562357 IRS2Q9Y4H2 1338 aa22.29■■□□□ 1.16
CMTM3-204ENST00000562357 HIBADHP31937 336 aaKnown RBP22.28■■□□□ 1.16
CMTM3-204ENST00000562357 C2orf69Q8N8R5 385 aa22.28■■□□□ 1.16
CMTM3-204ENST00000562357 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
CMTM3-204ENST00000562357 HHIPL1Q96JK4 782 aa22.28■■□□□ 1.16
CMTM3-204ENST00000562357 MAP2K1Q02750 393 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-204ENST00000562357 LRRC24Q50LG9 513 aa22.27■■□□□ 1.16
CMTM3-204ENST00000562357 CAVIN4Q5BKX8 364 aa22.27■■□□□ 1.16
CMTM3-204ENST00000562357 CYP4F22Q6NT55 531 aa22.27■■□□□ 1.16
CMTM3-204ENST00000562357 A0A1B0GUL6 1792 aa22.27■■□□□ 1.16
CMTM3-204ENST00000562357 ASTN2O75129 1339 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-204ENST00000562357 PDE8BO95263 885 aa22.26■■□□□ 1.15
CMTM3-204ENST00000562357 HUNKP57058 714 aa22.26■■□□□ 1.15
CMTM3-204ENST00000562357 FKBP1AP62942 108 aaKnown RBP22.26■■□□□ 1.15
CMTM3-204ENST00000562357 KLHDC4Q8TBB5 520 aa22.26■■□□□ 1.15
CMTM3-204ENST00000562357 GBA2Q9HCG7 927 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-204ENST00000562357 EYA2O00167 538 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 FRAT2O75474 233 aaPredicted RBP22.25■■□□□ 1.15
CMTM3-204ENST00000562357 SASH1O94885 1247 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 GNAI3P08754 354 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 GYG1P46976 350 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 INTS3Q68E01 1043 aaKnown RBP22.25■■□□□ 1.15
CMTM3-204ENST00000562357 ATF7IPQ6VMQ6 1270 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 CDCA5Q96FF9 252 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 BEGAINQ9BUH8 593 aa22.25■■□□□ 1.15
CMTM3-204ENST00000562357 WNT10BO00744 389 aa22.24■■□□□ 1.15
CMTM3-204ENST00000562357 IFIT1P09914 478 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms