RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 ZBTB43O43298 467 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 ZNF445P59923 1031 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 UBXN1Q04323 297 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 CEP85Q6P2H3 762 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 GABPB1Q06547 395 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 ATP8B2P98198 1209 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 KIF5AQ12840 1032 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 CREB3L3Q68CJ9 461 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 TSPYL6Q8N831 410 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 AFAP1L1Q8TED9 768 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 HOMER2Q9NSB8 354 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 PA2G4Q9UQ80 394 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 KRT86O43790 486 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 KRT13P13646 458 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 DZIP1Q86YF9 867 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
GTF3C1-202ENST00000561623 MXRA7P84157 204 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 PTPDC1A2A3K4 754 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 CHMLP26374 656 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 OTUD7AQ8TE49 926 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 ACSBG1Q96GR2 724 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 PYM1Q9BRP8 204 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 TMOD3Q9NYL9 352 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 GPTP24298 496 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 ZNF75DP51815 510 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 KRT83P78385 493 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 FAM173BQ6P4H8 233 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 SPAG5Q96R06 1193 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 MCMDC2Q4G0Z9 681 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 CBX8Q9HC52 389 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
GTF3C1-202ENST00000561623 SELENOOQ9BVL4 669 aa11.58□□□□□ -0.55
GTF3C1-202ENST00000561623 LMBRD1Q9NUN5 540 aa11.58□□□□□ -0.55
GTF3C1-202ENST00000561623 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.55
GTF3C1-202ENST00000561623 RALGAPBQ86X10 1494 aa11.58□□□□□ -0.55
GTF3C1-202ENST00000561623 TLDC2A0PJX2 215 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 ANKRD18BA2A2Z9 1011 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 STARD3NLO95772 234 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 WTAPQ15007 396 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 SPAG1Q07617 926 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 PPP1R9BQ96SB3 815 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 OAS2P29728 719 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 CCDC42Q96M95 316 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 HPDP32754 393 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 NSD2O96028 1365 aa11.58□□□□□ -0.56
GTF3C1-202ENST00000561623 TMEM110-MUSTN1A8MSY1 372 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 PPP1R14CQ8TAE6 165 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 SBNO2Q9Y2G9 1366 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 TSPY2A6NKD2 308 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 RGS22Q8NE09 1264 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 RSRC1Q96IZ7 334 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 RXRAP19793 462 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 CCT6AP40227 531 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 RTN1Q16799 776 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 CFAP58Q5T655 872 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 TMEM63CQ9P1W3 806 aa11.57□□□□□ -0.56
GTF3C1-202ENST00000561623 ASIC1P78348 528 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 TTF1Q15361 905 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 AKR1B15C9JRZ8 316 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 PSMA7O14818 248 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 KIF5BP33176 963 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 CETN1Q12798 172 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 TNIP1Q15025 636 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 CCDC122Q5T0U0 273 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 HDAC9Q9UKV0 1011 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 IKBKGQ9Y6K9 419 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 VAV2P52735 878 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 SYCP3Q8IZU3 236 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 UBLCP1Q8WVY7 318 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 RASAL2Q9UJF2 1139 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 MYL5Q02045 173 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 NOS1P29475 1434 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 AMOTQ4VCS5 1084 aa11.56□□□□□ -0.56
GTF3C1-202ENST00000561623 NDUFAB1O14561 156 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 PARP3Q9Y6F1 533 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 FOXO3O43524 673 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 INPP5BP32019 993 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 KCNK9Q9NPC2 374 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 PLIN2Q99541 437 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 ST5P78524 1137 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms