RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CNTROBQ8N137 903 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 TRPM4Q8TD43 1214 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 GMLQ99445 158 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 EYA3Q99504 573 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 DBNDD1Q9H9R9 158 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 NSFL1CQ9UNZ2 370 aaKnown RBP8.77□□□□□ -1.01
SPG11-224ENST00000561268 GJA3Q9Y6H8 435 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 ZBED9Q6R2W3 1325 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 RAD17O75943 681 aa8.76□□□□□ -1.01
SPG11-224ENST00000561268 UFL1O94874 794 aa8.76□□□□□ -1.01
SPG11-224ENST00000561268 VIL1P09327 827 aaKnown RBP8.76□□□□□ -1.01
SPG11-224ENST00000561268 HIRAP54198 1017 aaPredicted RBP8.76□□□□□ -1.01
SPG11-224ENST00000561268 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
SPG11-224ENST00000561268 ANKRD18AQ8IVF6 992 aa8.76□□□□□ -1.01
SPG11-224ENST00000561268 TRMT2AQ8IZ69 625 aaKnown RBP8.76□□□□□ -1.01
SPG11-224ENST00000561268 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
SPG11-224ENST00000561268 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
SPG11-224ENST00000561268 CASP8AP2Q9UKL3 1982 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 SHTN1A0MZ66 631 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 E9PSI1 815 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 ALDH1L1O75891 902 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 HSPA1AP0DMV8 641 aaKnown RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 HSPA1BP0DMV9 641 aaKnown RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 ZNF280AP59817 542 aaPredicted RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 FOXO4P98177 505 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 MICALL2Q8IY33 904 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 FAM9BQ8IZU0 186 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 JARID2Q92833 1246 aaPredicted RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 HHIPL1Q96JK4 782 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 GPR101Q96P66 508 aaPredicted RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 MINPP1Q9UNW1 487 aa8.75□□□□□ -1.01
SPG11-224ENST00000561268 COL1A1P02452 1464 aaPredicted RBP8.75□□□□□ -1.01
SPG11-224ENST00000561268 CDK5RAP2Q96SN8 1893 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 MAST2Q6P0Q8 1798 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 F6X3S4 739 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 C6orf229H3BNL8 230 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 GRM8O00222 908 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 EGFRP00533 1210 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 ITGA6P23229 1130 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 CCT4P50991 539 aaKnown RBP8.74□□□□□ -1.01
SPG11-224ENST00000561268 BRPF1P55201 1214 aaPredicted RBP8.74□□□□□ -1.01
SPG11-224ENST00000561268 SLFN5Q08AF3 891 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 CST9Q5W186 159 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 PODNQ7Z5L7 613 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 AGBL3Q8NEM8 1001 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 KCNQ5Q9NR82 932 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 TLL2Q9Y6L7 1015 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 DOCK2Q92608 1830 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 PTPRCP08575 1304 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 PITPNM2Q9BZ72 1349 aa8.74□□□□□ -1.01
SPG11-224ENST00000561268 FOCADQ5VW36 1801 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 VEGFBP49765 207 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.01
SPG11-224ENST00000561268 RABL6Q3YEC7 729 aaPredicted RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 KAZALD1Q96I82 304 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 CCDC85AQ96PX6 553 aaPredicted RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 ZC3H12CQ9C0D7 883 aaKnown RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 MKRN1Q9UHC7 482 aaKnown RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 CNOT7Q9UIV1 285 aaKnown RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 LEMD3Q9Y2U8 911 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
SPG11-224ENST00000561268 MYH2Q9UKX2 1941 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 MYO3BQ8WXR4 1341 aa8.73□□□□□ -1.01
SPG11-224ENST00000561268 PTPRFP10586 1907 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 WTIPA6NIX2 430 aaPredicted RBP8.72□□□□□ -1.01
SPG11-224ENST00000561268 TRAF5O00463 557 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 CT47B1P0C2W7 299 aaPredicted RBP8.72□□□□□ -1.01
SPG11-224ENST00000561268 DOK7Q18PE1 504 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 KIF4BQ2VIQ3 1234 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 ALDH1L2Q3SY69 923 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 EPHA10Q5JZY3 1008 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 DACT2Q5SW24 774 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 SAPCD2Q86UD0 394 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 BCL2L13Q9BXK5 485 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 GLIS2Q9BZE0 524 aaPredicted RBP8.72□□□□□ -1.01
SPG11-224ENST00000561268 COA1Q9GZY4 146 aa8.72□□□□□ -1.01
SPG11-224ENST00000561268 BMP2KQ9NSY1 1161 aaPredicted RBP8.72□□□□□ -1.01
SPG11-224ENST00000561268 MYO5AQ9Y4I1 1855 aaKnown RBP8.72□□□□□ -1.01
SPG11-224ENST00000561268 SSC5DA1L4H1 1573 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 H7C1D1 291 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 KLRK1P26718 216 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 IGHMBP2P38935 993 aaKnown RBP8.71□□□□□ -1.02
SPG11-224ENST00000561268 MMP14P50281 582 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 CHRNDQ07001 517 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 STRIP1Q5VSL9 837 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 CDC37L1Q7L3B6 337 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 SSH1Q8WYL5 1049 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 KIF12Q96FN5 646 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 ZBED3Q96IU2 234 aaPredicted RBP8.71□□□□□ -1.02
SPG11-224ENST00000561268 SRCIN1Q9C0H9 1055 aa8.71□□□□□ -1.02
SPG11-224ENST00000561268 ANKRD2Q9GZV1 360 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms