RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 HDAC5Q9UQL6 1122 aa15.11■□□□□ 0.01
USP8-212ENST00000560730 ADAMTSL1Q8N6G6 1762 aa15.1■□□□□ 0.01
USP8-212ENST00000560730 LMOD1P29536 600 aaPredicted RBP15.1■□□□□ 0.01
USP8-212ENST00000560730 C15orf52Q6ZUT6 534 aaKnown RBP15.1■□□□□ 0.01
USP8-212ENST00000560730 ATG9AQ7Z3C6 839 aa15.1■□□□□ 0.01
USP8-212ENST00000560730 PODNQ7Z5L7 613 aa15.1■□□□□ 0.01
USP8-212ENST00000560730 SMC1BQ8NDV3 1235 aa15.1■□□□□ 0.01
USP8-212ENST00000560730 COA1Q9GZY4 146 aa15.1■□□□□ 0.01
USP8-212ENST00000560730 SIL1Q9H173 461 aa15.1■□□□□ 0.01
USP8-212ENST00000560730 EYA2O00167 538 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 ZBTB7BO15156 539 aaPredicted RBP15.09■□□□□ 0.01
USP8-212ENST00000560730 GNAI2P04899 355 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 FSTL1Q12841 308 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 METTL24Q5JXM2 366 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 VGLL2Q8N8G2 317 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 CNOT7Q9UIV1 285 aaKnown RBP15.09■□□□□ 0.01
USP8-212ENST00000560730 MROH5Q6ZUA9 1318 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 MTX1Q13505 466 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 UBE4AQ14139 1066 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 DPF2Q92785 391 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 MXD3Q9BW11 206 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 C1orf115Q9H7X2 142 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 CD209Q9NNX6 404 aa15.09■□□□□ 0.01
USP8-212ENST00000560730 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0
USP8-212ENST00000560730 PNMA6EA0A0J9YXQ4 647 aa15.08■□□□□ 0
USP8-212ENST00000560730 USP17L3A6NCW0 530 aa15.08■□□□□ 0
USP8-212ENST00000560730 USP17L4A6NCW7 530 aa15.08■□□□□ 0
USP8-212ENST00000560730 SRGAP3O43295 1099 aa15.08■□□□□ 0
USP8-212ENST00000560730 C20orf194Q5TEA3 1177 aa15.08■□□□□ 0
USP8-212ENST00000560730 RSBN1LQ6PCB5 846 aaPredicted RBP15.08■□□□□ 0
USP8-212ENST00000560730 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0
USP8-212ENST00000560730 LDHDQ86WU2 507 aa15.08■□□□□ 0
USP8-212ENST00000560730 MICALL2Q8IY33 904 aa15.08■□□□□ 0
USP8-212ENST00000560730 GMLQ99445 158 aa15.08■□□□□ 0
USP8-212ENST00000560730 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
USP8-212ENST00000560730 PDE8BO95263 885 aa15.07■□□□□ 0
USP8-212ENST00000560730 HSPA6P17066 643 aa15.07■□□□□ 0
USP8-212ENST00000560730 RPS12P25398 132 aaKnown RBP15.07■□□□□ 0
USP8-212ENST00000560730 GYG1P46976 350 aa15.07■□□□□ 0
USP8-212ENST00000560730 HIRAP54198 1017 aaPredicted RBP15.07■□□□□ 0
USP8-212ENST00000560730 DACT2Q5SW24 774 aa15.07■□□□□ 0
USP8-212ENST00000560730 PNMA8AQ86V59 439 aaPredicted RBP15.07■□□□□ 0
USP8-212ENST00000560730 TRPM4Q8TD43 1214 aa15.07■□□□□ 0
USP8-212ENST00000560730 FBXW7Q969H0 707 aa15.07■□□□□ 0
USP8-212ENST00000560730 FAM84BQ96KN1 310 aaPredicted RBP15.07■□□□□ 0
USP8-212ENST00000560730 COPRSQ9NQ92 184 aa15.07■□□□□ 0
USP8-212ENST00000560730 ADARB2Q9NS39 739 aaKnown RBP15.07■□□□□ 0
USP8-212ENST00000560730 CIAO1O76071 339 aa15.06■□□□□ 0
USP8-212ENST00000560730 EGFRP00533 1210 aa15.06■□□□□ 0
USP8-212ENST00000560730 FGFR2P21802 821 aa15.06■□□□□ 0
USP8-212ENST00000560730 GTF2IP78347 998 aa15.06■□□□□ 0
USP8-212ENST00000560730 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
USP8-212ENST00000560730 TTLL5Q6EMB2 1281 aa15.06■□□□□ 0
USP8-212ENST00000560730 USP50Q70EL3 339 aaPredicted RBP15.06■□□□□ 0
USP8-212ENST00000560730 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
USP8-212ENST00000560730 ZNF804AQ7Z570 1209 aa15.06■□□□□ 0
USP8-212ENST00000560730 COG6Q9Y2V7 657 aa15.06■□□□□ 0
USP8-212ENST00000560730 H7C1D1 291 aa15.05■□□□□ -0
USP8-212ENST00000560730 IL1R1P14778 569 aa15.05■□□□□ -0
USP8-212ENST00000560730 STRIP1Q5VSL9 837 aa15.05■□□□□ -0
USP8-212ENST00000560730 AGBL3Q8NEM8 1001 aa15.05■□□□□ -0
USP8-212ENST00000560730 ITGBL1O95965 494 aaPredicted RBP15.04■□□□□ -0
USP8-212ENST00000560730 MS4A1P11836 297 aa15.04■□□□□ -0
USP8-212ENST00000560730 HIBADHP31937 336 aaKnown RBP15.04■□□□□ -0
USP8-212ENST00000560730 ATP8B2P98198 1209 aa15.04■□□□□ -0
USP8-212ENST00000560730 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
USP8-212ENST00000560730 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
USP8-212ENST00000560730 RBM26Q5T8P6 1007 aaKnown RBP15.04■□□□□ -0
USP8-212ENST00000560730 FBXO33Q7Z6M2 555 aa15.04■□□□□ -0
USP8-212ENST00000560730 CEP126Q9P2H0 1117 aa15.04■□□□□ -0
USP8-212ENST00000560730 FBXO3Q9UK99 471 aa15.04■□□□□ -0
USP8-212ENST00000560730 JAG2Q9Y219 1238 aa15.04■□□□□ -0
USP8-212ENST00000560730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.04■□□□□ -0
USP8-212ENST00000560730 ZNF609O15014 1411 aa15.03■□□□□ -0
USP8-212ENST00000560730 IL15P40933 162 aaPredicted RBP15.03■□□□□ -0
USP8-212ENST00000560730 HTRA3P83110 453 aa15.03■□□□□ -0
USP8-212ENST00000560730 POLA2Q14181 598 aa15.03■□□□□ -0
USP8-212ENST00000560730 PUM3Q15397 648 aaKnown RBP15.03■□□□□ -0
USP8-212ENST00000560730 CERS5Q8N5B7 392 aa15.03■□□□□ -0
USP8-212ENST00000560730 TDRD7Q8NHU6 1098 aaKnown RBP15.03■□□□□ -0
USP8-212ENST00000560730 IQSEC3Q9UPP2 1182 aaPredicted RBP15.03■□□□□ -0
USP8-212ENST00000560730 BCAMP50895 628 aa15.02■□□□□ -0
USP8-212ENST00000560730 ZNF280AP59817 542 aaPredicted RBP15.02■□□□□ -0
USP8-212ENST00000560730 FMR1Q06787 632 aaKnown RBP eCLIP15.02■□□□□ -0
USP8-212ENST00000560730 CNTROBQ8N137 903 aa15.02■□□□□ -0
USP8-212ENST00000560730 SSH3Q8TE77 659 aa15.02■□□□□ -0
USP8-212ENST00000560730 SASH1O94885 1247 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 USP17L8P0C7I0 530 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 TFCP2Q12800 502 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 PDE3AQ14432 1141 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 ATP2B3Q16720 1220 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 LPIN2Q92539 896 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 PGAP2Q9UHJ9 254 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 ASTN2O75129 1339 aaPredicted RBP15.01□□□□□ -0.01
USP8-212ENST00000560730 PASKQ96RG2 1323 aa15.01□□□□□ -0.01
USP8-212ENST00000560730 IFIT1P09914 478 aaKnown RBP15□□□□□ -0.01
USP8-212ENST00000560730 SLC5A1P13866 664 aa15□□□□□ -0.01
USP8-212ENST00000560730 APLP1P51693 650 aa15□□□□□ -0.01
USP8-212ENST00000560730 KIF4BQ2VIQ3 1234 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms