RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 CAPN2P17655 700 aa14.37□□□□□ -0.11
SYNM-203ENST00000560674 IQCGQ9H095 443 aaKnown RBP14.37□□□□□ -0.11
SYNM-203ENST00000560674 LMBR1Q8WVP7 490 aa14.37□□□□□ -0.11
SYNM-203ENST00000560674 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
SYNM-203ENST00000560674 AK2P54819 239 aa14.37□□□□□ -0.11
SYNM-203ENST00000560674 CCDC6Q16204 474 aa14.37□□□□□ -0.11
SYNM-203ENST00000560674 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
SYNM-203ENST00000560674 NPHP3Q7Z494 1330 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 CCDC129Q6ZRS4 1044 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 XAGE3Q8WTP9 111 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 SREK1Q8WXA9 508 aaKnown RBP14.36□□□□□ -0.11
SYNM-203ENST00000560674 PAIP2Q9BPZ3 127 aaKnown RBP14.36□□□□□ -0.11
SYNM-203ENST00000560674 PLB1Q6P1J6 1458 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 ANKS4BQ8N8V4 417 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 FBXO31Q5XUX0 539 aaPredicted RBP14.36□□□□□ -0.11
SYNM-203ENST00000560674 C8orf58Q8NAV2 365 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 CCDC42Q96M95 316 aa14.36□□□□□ -0.11
SYNM-203ENST00000560674 CCDC94Q9BW85 323 aaPredicted RBP14.36□□□□□ -0.11
SYNM-203ENST00000560674 GTF2A1P52655 376 aaPredicted RBP14.36□□□□□ -0.11
SYNM-203ENST00000560674 INTS4Q96HW7 963 aaKnown RBP14.36□□□□□ -0.11
SYNM-203ENST00000560674 KSR2Q6VAB6 950 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 GTPBP4Q9BZE4 634 aaKnown RBP14.35□□□□□ -0.11
SYNM-203ENST00000560674 SYNCQ9H7C4 482 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
SYNM-203ENST00000560674 TRAF1Q13077 416 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 SLC9C2Q5TAH2 1124 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 TTC14Q96N46 770 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 MXRA7P84157 204 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 IFNKQ9P0W0 207 aa14.35□□□□□ -0.11
SYNM-203ENST00000560674 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 NAPAP54920 295 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
SYNM-203ENST00000560674 LMBR1LQ6UX01 489 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 COPS6Q7L5N1 327 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 UBE2Q2Q8WVN8 375 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 ZGPATQ8N5A5 531 aaKnown RBP14.34□□□□□ -0.11
SYNM-203ENST00000560674 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 CALM1P0DP23 149 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 CALM2P0DP24 149 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 CALM3P0DP25 149 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 UBXN1Q04323 297 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 CREB3L3Q68CJ9 461 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 SYT10Q6XYQ8 523 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 CCDC121Q6ZUS5 278 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 CAPZA3Q96KX2 299 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 VPS18Q9P253 973 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 GUCA1BQ9UMX6 200 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 BRAPQ7Z569 592 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 LZTFL1Q9NQ48 299 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
SYNM-203ENST00000560674 MRVI1Q9Y6F6 885 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 ZNF569Q5MCW4 686 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 MICALL1Q8N3F8 863 aa14.34□□□□□ -0.11
SYNM-203ENST00000560674 EBAG9O00559 213 aa14.33□□□□□ -0.11
SYNM-203ENST00000560674 CALML3P27482 149 aa14.33□□□□□ -0.11
SYNM-203ENST00000560674 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.33□□□□□ -0.11
SYNM-203ENST00000560674 ADAMTS2O95450 1211 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 KRT2P35908 639 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 CEP85Q6P2H3 762 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 RGS22Q8NE09 1264 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 PTPDC1A2A3K4 754 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 SELENOSQ9BQE4 189 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 TUBBP07437 444 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 ARID5AQ03989 594 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 APOBRQ0VD83 1088 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 TTLL12Q14166 644 aaPredicted RBP14.33□□□□□ -0.12
SYNM-203ENST00000560674 NAA16Q6N069 864 aaPredicted RBP14.33□□□□□ -0.12
SYNM-203ENST00000560674 RUFY3Q7L099 469 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 NEK11Q8NG66 645 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 SERPINA10Q9UK55 444 aa14.33□□□□□ -0.12
SYNM-203ENST00000560674 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
SYNM-203ENST00000560674 FBLN1P23142 703 aa14.32□□□□□ -0.12
SYNM-203ENST00000560674 PHACTR2O75167 634 aa14.32□□□□□ -0.12
SYNM-203ENST00000560674 STX17P56962 302 aa14.32□□□□□ -0.12
SYNM-203ENST00000560674 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
SYNM-203ENST00000560674 GNAT2P19087 354 aa14.32□□□□□ -0.12
SYNM-203ENST00000560674 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
SYNM-203ENST00000560674 RAD50Q92878 1312 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 RHOXF2BP0C7M4 288 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 KRT79Q5XKE5 535 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 GSTA5Q7RTV2 222 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 OTUD6BQ8N6M0 293 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 RHOXF2Q9BQY4 288 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 PARD3Q8TEW0 1356 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 PABPN1LA6NDY0 278 aaKnown RBP14.31□□□□□ -0.12
SYNM-203ENST00000560674 VAV2P52735 878 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
SYNM-203ENST00000560674 MPHOSPH6Q99547 160 aaKnown RBP14.31□□□□□ -0.12
SYNM-203ENST00000560674 POLR3AO14802 1390 aaPredicted RBP14.31□□□□□ -0.12
SYNM-203ENST00000560674 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
SYNM-203ENST00000560674 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
SYNM-203ENST00000560674 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms