RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
PPP1R3E-204ENST00000559942 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
PPP1R3E-204ENST00000559942 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
PPP1R3E-204ENST00000559942 NECAB2Q7Z6G3 386 aa12.7□□□□□ -0.38
PPP1R3E-204ENST00000559942 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
PPP1R3E-204ENST00000559942 CLMNQ96JQ2 1002 aa12.7□□□□□ -0.38
PPP1R3E-204ENST00000559942 FZD1Q9UP38 647 aa12.7□□□□□ -0.38
PPP1R3E-204ENST00000559942 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
PPP1R3E-204ENST00000559942 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
PPP1R3E-204ENST00000559942 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
PPP1R3E-204ENST00000559942 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
PPP1R3E-204ENST00000559942 UNC93B1Q9H1C4 597 aa12.69□□□□□ -0.38
PPP1R3E-204ENST00000559942 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
PPP1R3E-204ENST00000559942 FAM205AQ6ZU69 1335 aa12.68□□□□□ -0.38
PPP1R3E-204ENST00000559942 HOXD10P28358 340 aa12.68□□□□□ -0.38
PPP1R3E-204ENST00000559942 ATXN2LQ8WWM7 1075 aaKnown RBP12.68□□□□□ -0.38
PPP1R3E-204ENST00000559942 SRRDQ9UH36 339 aa12.68□□□□□ -0.38
PPP1R3E-204ENST00000559942 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
PPP1R3E-204ENST00000559942 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
PPP1R3E-204ENST00000559942 NUP98P52948 1817 aa12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 GJA5P36382 358 aa12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 MAP3K11Q16584 847 aa12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 RSBN1LQ6PCB5 846 aaPredicted RBP12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 USP38Q8NB14 1042 aa12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 ASB2Q96Q27 587 aa12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
PPP1R3E-204ENST00000559942 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 WDHD1O75717 1129 aaPredicted RBP12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 TCF20Q9UGU0 1960 aaKnown RBP12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 CDH23Q9H251 3354 aa12.66□□□□□ -0.38
PPP1R3E-204ENST00000559942 UNCXA6NJT0 531 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 HMOX1P09601 288 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 GPTP24298 496 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 FOXK2Q01167 660 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 TEFQ10587 303 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 TMEM31Q5JXX7 168 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 DIS3LQ8TF46 1054 aaKnown RBP12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 DEFB118Q96PH6 123 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 EYA3Q99504 573 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 ZDBF2Q9HCK1 2354 aa12.65□□□□□ -0.38
PPP1R3E-204ENST00000559942 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 TLR2O60603 784 aa12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 NBPF10Q6P3W6 841 aaKnown RBP12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 TTYH1Q9H313 450 aaPredicted RBP12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
PPP1R3E-204ENST00000559942 G3V3G9 751 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 OSBPP22059 807 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 IL13P35225 146 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 PSMC4P43686 418 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 GRAPQ13588 217 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 TMC4Q7Z404 712 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 POTEDQ86YR6 584 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 GMLQ99445 158 aa12.63□□□□□ -0.39
PPP1R3E-204ENST00000559942 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 CACNA1BQ00975 2339 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 WNT10BO00744 389 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 NTSR2O95665 410 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 MRPS5P82675 430 aaKnown RBP12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 BRI3BPQ8WY22 251 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
PPP1R3E-204ENST00000559942 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 KCNQ3O43525 872 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 CTGFP29279 349 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 CCL15Q16663 113 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 SLAIN1Q8ND83 568 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 ZC3H12CQ9C0D7 883 aaKnown RBP12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 THEGQ9P2T0 379 aa12.61□□□□□ -0.39
PPP1R3E-204ENST00000559942 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
PPP1R3E-204ENST00000559942 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
PPP1R3E-204ENST00000559942 PKD1L2Q7Z442 2459 aa12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 IREB2P48200 963 aaKnown RBP12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 MORC1Q86VD1 984 aa12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 NECAB3Q96P71 396 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 PSME4Q14997 1843 aa12.59□□□□□ -0.39
PPP1R3E-204ENST00000559942 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
PPP1R3E-204ENST00000559942 GTF2A2P52657 109 aa12.58□□□□□ -0.4
PPP1R3E-204ENST00000559942 ANKRD13AQ8IZ07 590 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms