RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 KCNQ5Q9NR82 932 aa28.58■■■□□ 2.17
PABPN1-207ENST00000556821 MED23Q9ULK4 1368 aa28.58■■■□□ 2.17
PABPN1-207ENST00000556821 CA12O43570 354 aa28.57■■■□□ 2.16
PABPN1-207ENST00000556821 TNIP1Q15025 636 aa28.57■■■□□ 2.16
PABPN1-207ENST00000556821 USP50Q70EL3 339 aaPredicted RBP28.57■■■□□ 2.16
PABPN1-207ENST00000556821 USP44Q9H0E7 712 aa28.57■■■□□ 2.16
PABPN1-207ENST00000556821 PSMD14O00487 310 aa28.56■■■□□ 2.16
PABPN1-207ENST00000556821 ZBED9Q6R2W3 1325 aa28.56■■■□□ 2.16
PABPN1-207ENST00000556821 CHRNDQ07001 517 aa28.55■■■□□ 2.16
PABPN1-207ENST00000556821 PAXIP1Q6ZW49 1069 aaPredicted RBP28.55■■■□□ 2.16
PABPN1-207ENST00000556821 SAPCD2Q86UD0 394 aa28.55■■■□□ 2.16
PABPN1-207ENST00000556821 ZNF594Q96JF6 807 aaPredicted RBP28.55■■■□□ 2.16
PABPN1-207ENST00000556821 KIF16BQ96L93 1317 aa28.54■■■□□ 2.16
PABPN1-207ENST00000556821 RABL6Q3YEC7 729 aaPredicted RBP28.54■■■□□ 2.16
PABPN1-207ENST00000556821 ANKRD44Q8N8A2 993 aa28.54■■■□□ 2.16
PABPN1-207ENST00000556821 HHIPL1Q96JK4 782 aa28.54■■■□□ 2.16
PABPN1-207ENST00000556821 BICC1Q9H694 974 aaKnown RBP28.54■■■□□ 2.16
PABPN1-207ENST00000556821 SHTN1A0MZ66 631 aa28.53■■■□□ 2.16
PABPN1-207ENST00000556821 GRM1Q13255 1194 aa28.53■■■□□ 2.16
PABPN1-207ENST00000556821 CCDC57Q2TAC2 916 aa28.53■■■□□ 2.16
PABPN1-207ENST00000556821 ANKRD2Q9GZV1 360 aa28.53■■■□□ 2.16
PABPN1-207ENST00000556821 ZBTB12Q9Y330 459 aaPredicted RBP28.53■■■□□ 2.16
PABPN1-207ENST00000556821 ZNF609O15014 1411 aa28.52■■■□□ 2.16
PABPN1-207ENST00000556821 TXNRD3Q86VQ6 643 aa28.52■■■□□ 2.16
PABPN1-207ENST00000556821 API5Q9BZZ5 524 aaKnown RBP28.52■■■□□ 2.16
PABPN1-207ENST00000556821 LEMD3Q9Y2U8 911 aa28.52■■■□□ 2.16
PABPN1-207ENST00000556821 ZNF804BA4D1E1 1349 aa28.51■■■□□ 2.15
PABPN1-207ENST00000556821 KLRK1P26718 216 aa28.51■■■□□ 2.15
PABPN1-207ENST00000556821 ADARB2Q9NS39 739 aaKnown RBP28.51■■■□□ 2.15
PABPN1-207ENST00000556821 IRS2Q9Y4H2 1338 aa28.5■■■□□ 2.15
PABPN1-207ENST00000556821 MYH13Q9UKX3 1938 aa28.5■■■□□ 2.15
PABPN1-207ENST00000556821 G3V3G9 751 aa28.49■■■□□ 2.15
PABPN1-207ENST00000556821 BCAR3O75815 825 aa28.49■■■□□ 2.15
PABPN1-207ENST00000556821 DCAF8Q5TAQ9 597 aa28.49■■■□□ 2.15
PABPN1-207ENST00000556821 ARHGAP45Q92619 1136 aa28.49■■■□□ 2.15
PABPN1-207ENST00000556821 PGAP2Q9UHJ9 254 aa28.49■■■□□ 2.15
PABPN1-207ENST00000556821 CNOT7Q9UIV1 285 aaKnown RBP28.49■■■□□ 2.15
PABPN1-207ENST00000556821 SNAP23O00161 211 aa28.48■■■□□ 2.15
PABPN1-207ENST00000556821 TAF5LO75529 589 aa28.48■■■□□ 2.15
PABPN1-207ENST00000556821 VIL1P09327 827 aaKnown RBP28.48■■■□□ 2.15
PABPN1-207ENST00000556821 LDHAL6AQ6ZMR3 332 aa28.48■■■□□ 2.15
PABPN1-207ENST00000556821 MICALL2Q8IY33 904 aa28.48■■■□□ 2.15
PABPN1-207ENST00000556821 HELBQ8NG08 1087 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-207ENST00000556821 DPF2Q92785 391 aa28.48■■■□□ 2.15
PABPN1-207ENST00000556821 ARAP2Q8WZ64 1704 aa28.48■■■□□ 2.15
PABPN1-207ENST00000556821 DGKZQ13574 1117 aa28.47■■■□□ 2.15
PABPN1-207ENST00000556821 TAF7LQ5H9L4 462 aa28.47■■■□□ 2.15
PABPN1-207ENST00000556821 PODNQ7Z5L7 613 aa28.47■■■□□ 2.15
PABPN1-207ENST00000556821 TRPM4Q8TD43 1214 aa28.47■■■□□ 2.15
PABPN1-207ENST00000556821 RPS12P25398 132 aaKnown RBP28.46■■■□□ 2.15
PABPN1-207ENST00000556821 HIRAP54198 1017 aaPredicted RBP28.46■■■□□ 2.15
PABPN1-207ENST00000556821 PUS3Q9BZE2 481 aaKnown RBP28.46■■■□□ 2.15
PABPN1-207ENST00000556821 TNNQ9UQP3 1299 aa28.46■■■□□ 2.15
PABPN1-207ENST00000556821 ECM29Q5VYK3 1845 aa28.46■■■□□ 2.15
PABPN1-207ENST00000556821 CELF2O95319 508 aaKnown RBP28.45■■■□□ 2.14
PABPN1-207ENST00000556821 CNNM1Q9NRU3 951 aa28.45■■■□□ 2.14
PABPN1-207ENST00000556821 TRIM27P14373 513 aa28.44■■■□□ 2.14
PABPN1-207ENST00000556821 COA1Q9GZY4 146 aa28.44■■■□□ 2.14
PABPN1-207ENST00000556821 KCNJ4P48050 445 aa28.43■■■□□ 2.14
PABPN1-207ENST00000556821 INTS3Q68E01 1043 aaKnown RBP28.43■■■□□ 2.14
PABPN1-207ENST00000556821 H7C1D1 291 aa28.42■■■□□ 2.14
PABPN1-207ENST00000556821 EGFRP00533 1210 aa28.42■■■□□ 2.14
PABPN1-207ENST00000556821 RSBN1LQ6PCB5 846 aaPredicted RBP28.42■■■□□ 2.14
PABPN1-207ENST00000556821 C15orf52Q6ZUT6 534 aaKnown RBP28.42■■■□□ 2.14
PABPN1-207ENST00000556821 SAMD7Q7Z3H4 446 aa28.42■■■□□ 2.14
PABPN1-207ENST00000556821 GMLQ99445 158 aa28.42■■■□□ 2.14
PABPN1-207ENST00000556821 USP17L3A6NCW0 530 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 USP17L4A6NCW7 530 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 UBTFL1P0CB47 393 aaPredicted RBP28.41■■■□□ 2.14
PABPN1-207ENST00000556821 ATF7IPQ6VMQ6 1270 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 USP17L1Q7RTZ2 530 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 ZIC5Q96T25 663 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 MEIS3Q99687 375 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 RIPOR2Q9Y4F9 1068 aa28.41■■■□□ 2.14
PABPN1-207ENST00000556821 AGBL3Q8NEM8 1001 aa28.4■■■□□ 2.14
PABPN1-207ENST00000556821 KLHDC4Q8TBB5 520 aa28.4■■■□□ 2.14
PABPN1-207ENST00000556821 FRAT1Q92837 279 aaPredicted RBP28.4■■■□□ 2.14
PABPN1-207ENST00000556821 GLIS2Q9BZE0 524 aaPredicted RBP28.4■■■□□ 2.14
PABPN1-207ENST00000556821 IPO8O15397 1037 aaKnown RBP28.39■■■□□ 2.14
PABPN1-207ENST00000556821 PLIN1O60240 522 aa28.39■■■□□ 2.14
PABPN1-207ENST00000556821 RFX5P48382 616 aaPredicted RBP28.39■■■□□ 2.14
PABPN1-207ENST00000556821 LRRC24Q50LG9 513 aa28.39■■■□□ 2.14
PABPN1-207ENST00000556821 DACT2Q5SW24 774 aa28.39■■■□□ 2.14
PABPN1-207ENST00000556821 TBC1D10BQ4KMP7 808 aaPredicted RBP28.38■■■□□ 2.13
PABPN1-207ENST00000556821 ZC3H15Q8WU90 426 aaKnown RBP28.37■■■□□ 2.13
PABPN1-207ENST00000556821 MXD3Q9BW11 206 aa28.37■■■□□ 2.13
PABPN1-207ENST00000556821 CD209Q9NNX6 404 aa28.37■■■□□ 2.13
PABPN1-207ENST00000556821 LRRFIP2Q9Y608 721 aaKnown RBP28.37■■■□□ 2.13
PABPN1-207ENST00000556821 ZNF280AP59817 542 aaPredicted RBP28.36■■■□□ 2.13
PABPN1-207ENST00000556821 STRIP1Q5VSL9 837 aa28.36■■■□□ 2.13
PABPN1-207ENST00000556821 MROH5Q6ZUA9 1318 aa28.36■■■□□ 2.13
PABPN1-207ENST00000556821 NOGQ13253 232 aa28.35■■■□□ 2.13
PABPN1-207ENST00000556821 KIF4BQ2VIQ3 1234 aa28.35■■■□□ 2.13
PABPN1-207ENST00000556821 VGLL2Q8N8G2 317 aa28.35■■■□□ 2.13
PABPN1-207ENST00000556821 CLUAP1Q96AJ1 413 aa28.35■■■□□ 2.13
PABPN1-207ENST00000556821 UBE4AQ14139 1066 aa28.34■■■□□ 2.13
PABPN1-207ENST00000556821 ZKSCAN2Q63HK3 967 aa28.34■■■□□ 2.13
PABPN1-207ENST00000556821 TNRC18O15417 2968 aaPredicted RBP28.34■■■□□ 2.13
PABPN1-207ENST00000556821 PTPN12Q05209 780 aaKnown RBP28.33■■■□□ 2.13
PABPN1-207ENST00000556821 RBM26Q5T8P6 1007 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms