RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 MCM10Q7L590 875 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 CRACR2BQ8N4Y2 399 aaPredicted RBP12.27□□□□□ -0.45
SPTB-208ENST00000556626 ZNF622Q969S3 477 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■□□□ 11.8
SPTB-208ENST00000556626 BAG1Q99933 345 aaPredicted RBP12.27□□□□□ -0.45
SPTB-208ENST00000556626 FAM184BQ9ULE4 1060 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 TXNDC16Q9P2K2 825 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 GMNNO75496 209 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 NEDD9Q14511 834 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 UTP11Q9Y3A2 253 aaKnown RBP12.27□□□□□ -0.45
SPTB-208ENST00000556626 USH1CQ9Y6N9 552 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
SPTB-208ENST00000556626 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 ANKIB1Q9P2G1 1089 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 CCDC26Q8TAB7 109 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 SMIM23A6NLE4 172 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 DMTNQ08495 405 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 BANK1Q8NDB2 785 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 PPP1R12CQ9BZL4 782 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 NSD2O96028 1365 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 CASQ2O14958 399 aaPredicted RBP12.26□□□□□ -0.45
SPTB-208ENST00000556626 GPR161Q8N6U8 529 aaKnown RBP12.26□□□□□ -0.45
SPTB-208ENST00000556626 TAF7Q15545 349 aaPredicted RBP12.26□□□□□ -0.45
SPTB-208ENST00000556626 CCDC25Q86WR0 208 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 TMOD2Q9NZR1 351 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 MRVI1Q9Y6F6 885 aa12.26□□□□□ -0.45
SPTB-208ENST00000556626 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
SPTB-208ENST00000556626 ERCC6LQ2NKX8 1250 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 TAOK1Q7L7X3 1001 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 IQGAP2Q13576 1575 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 IGF1RP08069 1367 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 MRPS9P82933 396 aaKnown RBP12.25□□□□□ -0.45
SPTB-208ENST00000556626 KIAA1524Q8TCG1 905 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
SPTB-208ENST00000556626 IFNKQ9P0W0 207 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 WHAMMP3Q1A5X7 153 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 UTP14CQ5TAP6 766 aaKnown RBP12.25□□□□□ -0.45
SPTB-208ENST00000556626 CCDC62Q6P9F0 684 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 SEPT14Q6ZU15 432 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 SDSP20132 328 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.25□□□□□ -0.45
SPTB-208ENST00000556626 UTP14AQ9BVJ6 771 aaKnown RBP12.25□□□□□ -0.45
SPTB-208ENST00000556626 ARID5AQ03989 594 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 FAM114A2Q9NRY5 505 aa12.25□□□□□ -0.45
SPTB-208ENST00000556626 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 IFT20Q8IY31 132 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
SPTB-208ENST00000556626 GOLGA6BA6NDN3 693 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 FAM160A1Q05DH4 1040 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 CALCOCO2Q13137 446 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
SPTB-208ENST00000556626 SAMM50Q9Y512 469 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 AKR1B15C9JRZ8 316 aaPredicted RBP12.24□□□□□ -0.45
SPTB-208ENST00000556626 KRT23Q9C075 422 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.45
SPTB-208ENST00000556626 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 BICD1Q96G01 975 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 NPHP3Q7Z494 1330 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 IGHDP01880 384 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 KARSQ15046 597 aaKnown RBP12.24□□□□□ -0.45
SPTB-208ENST00000556626 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 MCUR1Q96AQ8 359 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 MTUS1Q9ULD2 1270 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 CCDC122Q5T0U0 273 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 TCHPQ9BT92 498 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 RABGAP1Q9Y3P9 1069 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 SPTLC2O15270 562 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 CCDC38Q502W7 563 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
SPTB-208ENST00000556626 ATL3Q6DD88 541 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 RNF10Q8N5U6 811 aaKnown RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 NUTM2AQ8IVF1 878 aaPredicted RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 CCDC170Q8IYT3 715 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 ANKRD24Q8TF21 1146 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 CNNM2Q9H8M5 875 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 RASSF2P50749 326 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 CFAP43Q8NDM7 1665 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 ACTN4O43707 911 aaKnown RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 GKAP1Q5VSY0 366 aaPredicted RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 NAPGQ99747 312 aaPredicted RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 RIOK3O14730 519 aaKnown RBP12.23□□□□□ -0.45
SPTB-208ENST00000556626 PPFIA1Q13136 1202 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 NAIPQ13075 1403 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 FLIIQ13045 1269 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 KIF1BO60333 1816 aa12.23□□□□□ -0.45
SPTB-208ENST00000556626 ZBTB43O43298 467 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms