RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 PLIN1O60240 522 aa27.44■■□□□ 1.98
NDUFB1-205ENST00000556555 VIL1P09327 827 aaKnown RBP27.44■■□□□ 1.98
NDUFB1-205ENST00000556555 GMPSP49915 693 aaPredicted RBP27.44■■□□□ 1.98
NDUFB1-205ENST00000556555 LRRC24Q50LG9 513 aa27.44■■□□□ 1.98
NDUFB1-205ENST00000556555 KLHDC4Q8TBB5 520 aa27.44■■□□□ 1.98
NDUFB1-205ENST00000556555 CHMP4BQ9H444 224 aaKnown RBP27.44■■□□□ 1.98
NDUFB1-205ENST00000556555 IRS2Q9Y4H2 1338 aa27.43■■□□□ 1.98
NDUFB1-205ENST00000556555 SRGAP3O43295 1099 aa27.43■■□□□ 1.98
NDUFB1-205ENST00000556555 PDE8BO95263 885 aa27.43■■□□□ 1.98
NDUFB1-205ENST00000556555 ZNF804AQ7Z570 1209 aa27.43■■□□□ 1.98
NDUFB1-205ENST00000556555 TXNRD3Q86VQ6 643 aa27.43■■□□□ 1.98
NDUFB1-205ENST00000556555 USP17L3A6NCW0 530 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 USP17L4A6NCW7 530 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 PDE3AQ14432 1141 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 USP17L1Q7RTZ2 530 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 LDHDQ86WU2 507 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 VGLL2Q8N8G2 317 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 PANK1Q8TE04 598 aa27.42■■□□□ 1.98
NDUFB1-205ENST00000556555 IL15P40933 162 aaPredicted RBP27.41■■□□□ 1.98
NDUFB1-205ENST00000556555 USP50Q70EL3 339 aaPredicted RBP27.41■■□□□ 1.98
NDUFB1-205ENST00000556555 AGBL3Q8NEM8 1001 aa27.41■■□□□ 1.98
NDUFB1-205ENST00000556555 ADARB2Q9NS39 739 aaKnown RBP27.41■■□□□ 1.98
NDUFB1-205ENST00000556555 DDX19BQ9UMR2 479 aa27.41■■□□□ 1.98
NDUFB1-205ENST00000556555 KLRK1P26718 216 aa27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 EPS15P42566 896 aa27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 MVPQ14764 893 aaKnown RBP27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 STRIP1Q5VSL9 837 aa27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 CD209Q9NNX6 404 aa27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 KCNQ5Q9NR82 932 aa27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 SCN9AQ15858 1988 aa27.4■■□□□ 1.98
NDUFB1-205ENST00000556555 PSME4Q14997 1843 aa27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 H7C1D1 291 aa27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 SNAP23O00161 211 aa27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 PUM3Q15397 648 aaKnown RBP27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 CHADLQ6NUI6 762 aa27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 RSBN1LQ6PCB5 846 aaPredicted RBP27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 ATG9AQ7Z3C6 839 aa27.39■■□□□ 1.98
NDUFB1-205ENST00000556555 MYO3BQ8WXR4 1341 aa27.39■■□□□ 1.97
NDUFB1-205ENST00000556555 CEP126Q9P2H0 1117 aa27.38■■□□□ 1.97
NDUFB1-205ENST00000556555 CNOT7Q9UIV1 285 aaKnown RBP27.38■■□□□ 1.97
NDUFB1-205ENST00000556555 IL1R1P14778 569 aa27.37■■□□□ 1.97
NDUFB1-205ENST00000556555 MMP14P50281 582 aa27.37■■□□□ 1.97
NDUFB1-205ENST00000556555 EAPPQ56P03 285 aaPredicted RBP27.37■■□□□ 1.97
NDUFB1-205ENST00000556555 SIL1Q9H173 461 aa27.37■■□□□ 1.97
NDUFB1-205ENST00000556555 ZBTB12Q9Y330 459 aaPredicted RBP27.37■■□□□ 1.97
NDUFB1-205ENST00000556555 IFIT1P09914 478 aaKnown RBP27.36■■□□□ 1.97
NDUFB1-205ENST00000556555 HIBADHP31937 336 aaKnown RBP27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 ATP8B2P98198 1209 aa27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 CAVIN4Q5BKX8 364 aa27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 MICALL2Q8IY33 904 aa27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 LPIN2Q92539 896 aa27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 PA2G4Q9UQ80 394 aaKnown RBP27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 ADAMTSL1Q8N6G6 1762 aa27.35■■□□□ 1.97
NDUFB1-205ENST00000556555 FGFR2P21802 821 aa27.34■■□□□ 1.97
NDUFB1-205ENST00000556555 DACT2Q5SW24 774 aa27.34■■□□□ 1.97
NDUFB1-205ENST00000556555 TTLL5Q6EMB2 1281 aa27.34■■□□□ 1.97
NDUFB1-205ENST00000556555 SSH3Q8TE77 659 aa27.34■■□□□ 1.97
NDUFB1-205ENST00000556555 PNMA6EA0A0J9YXQ4 647 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 SLC5A1P13866 664 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 HSPA6P17066 643 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 POLA2Q14181 598 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 VPS37DQ86XT2 251 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 ZC3H15Q8WU90 426 aaKnown RBP27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 FAM84BQ96KN1 310 aaPredicted RBP27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 GMLQ99445 158 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 CLEC11AQ9Y240 323 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 COG6Q9Y2V7 657 aa27.33■■□□□ 1.97
NDUFB1-205ENST00000556555 SASH1O94885 1247 aa27.32■■□□□ 1.96
NDUFB1-205ENST00000556555 POTEIP0CG38 1075 aa27.32■■□□□ 1.96
NDUFB1-205ENST00000556555 POTEJP0CG39 1038 aa27.32■■□□□ 1.96
NDUFB1-205ENST00000556555 GYG1P46976 350 aa27.31■■□□□ 1.96
NDUFB1-205ENST00000556555 FKBP1AP62942 108 aaKnown RBP27.31■■□□□ 1.96
NDUFB1-205ENST00000556555 GTF2IP78347 998 aa27.31■■□□□ 1.96
NDUFB1-205ENST00000556555 FBXO33Q7Z6M2 555 aa27.31■■□□□ 1.96
NDUFB1-205ENST00000556555 TDRD7Q8NHU6 1098 aaKnown RBP27.31■■□□□ 1.96
NDUFB1-205ENST00000556555 C1orf115Q9H7X2 142 aa27.31■■□□□ 1.96
NDUFB1-205ENST00000556555 USP17L8P0C7I0 530 aa27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 ZNF280AP59817 542 aaPredicted RBP27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 G3BP1Q13283 466 aaKnown RBP eCLIP27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 ATP2B3Q16720 1220 aa27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 FBXW7Q969H0 707 aa27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 ZBTB40Q9NUA8 1239 aa27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 AKAP2Q9Y2D5 859 aa27.3■■□□□ 1.96
NDUFB1-205ENST00000556555 CEP85Q6P2H3 762 aa27.29■■□□□ 1.96
NDUFB1-205ENST00000556555 OGFOD1Q8N543 542 aa27.29■■□□□ 1.96
NDUFB1-205ENST00000556555 FAM205AQ6ZU69 1335 aa27.29■■□□□ 1.96
NDUFB1-205ENST00000556555 PGAP2Q9UHJ9 254 aa27.28■■□□□ 1.96
NDUFB1-205ENST00000556555 APLP1P51693 650 aa27.27■■□□□ 1.96
NDUFB1-205ENST00000556555 RPAP2Q8IXW5 612 aaPredicted RBP27.27■■□□□ 1.96
NDUFB1-205ENST00000556555 ZNF646O15015 1829 aaPredicted RBP27.26■■□□□ 1.95
NDUFB1-205ENST00000556555 RRP1P56182 461 aaKnown RBP27.26■■□□□ 1.95
NDUFB1-205ENST00000556555 C20orf194Q5TEA3 1177 aa27.26■■□□□ 1.95
NDUFB1-205ENST00000556555 TRPM4Q8TD43 1214 aa27.26■■□□□ 1.95
NDUFB1-205ENST00000556555 HDAC9Q9UKV0 1011 aa27.26■■□□□ 1.95
NDUFB1-205ENST00000556555 NOP58Q9Y2X3 529 aaKnown RBP27.26■■□□□ 1.95
NDUFB1-205ENST00000556555 SHTN1A0MZ66 631 aa27.25■■□□□ 1.95
NDUFB1-205ENST00000556555 ZBTB22O15209 634 aa27.25■■□□□ 1.95
NDUFB1-205ENST00000556555 KIF4BQ2VIQ3 1234 aa27.25■■□□□ 1.95
NDUFB1-205ENST00000556555 SAMD7Q7Z3H4 446 aa27.25■■□□□ 1.95
NDUFB1-205ENST00000556555 CNTROBQ8N137 903 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms