RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 MED23Q9ULK4 1368 aa19.86■□□□□ 0.77
SUPT16H-205ENST00000556217 KSR2Q6VAB6 950 aa19.86■□□□□ 0.77
SUPT16H-205ENST00000556217 RASAL3Q86YV0 1011 aa19.86■□□□□ 0.77
SUPT16H-205ENST00000556217 OGFOD1Q8N543 542 aa19.86■□□□□ 0.77
SUPT16H-205ENST00000556217 BSDC1Q9NW68 430 aaPredicted RBP19.86■□□□□ 0.77
SUPT16H-205ENST00000556217 MYO3BQ8WXR4 1341 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 TTLL11Q8NHH1 800 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 STK31Q9BXU1 1019 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 HDAC9Q9UKV0 1011 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 MINPP1Q9UNW1 487 aa19.84■□□□□ 0.77
SUPT16H-205ENST00000556217 MMP14P50281 582 aa19.83■□□□□ 0.77
SUPT16H-205ENST00000556217 IGKV5-2P06315 115 aa19.82■□□□□ 0.76
SUPT16H-205ENST00000556217 NF2P35240 595 aa19.82■□□□□ 0.76
SUPT16H-205ENST00000556217 CCT4P50991 539 aaKnown RBP19.82■□□□□ 0.76
SUPT16H-205ENST00000556217 FBXW7Q969H0 707 aa19.82■□□□□ 0.76
SUPT16H-205ENST00000556217 COA1Q9GZY4 146 aa19.82■□□□□ 0.76
SUPT16H-205ENST00000556217 GREM2Q9H772 168 aa19.82■□□□□ 0.76
SUPT16H-205ENST00000556217 IGHMBP2P38935 993 aaKnown RBP19.81■□□□□ 0.76
SUPT16H-205ENST00000556217 TTLL12Q14166 644 aaPredicted RBP19.81■□□□□ 0.76
SUPT16H-205ENST00000556217 NBPF9Q3BBW0 867 aa19.81■□□□□ 0.76
SUPT16H-205ENST00000556217 DACT2Q5SW24 774 aa19.81■□□□□ 0.76
SUPT16H-205ENST00000556217 STRIP1Q5VSL9 837 aa19.81■□□□□ 0.76
SUPT16H-205ENST00000556217 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
SUPT16H-205ENST00000556217 LEMD3Q9Y2U8 911 aa19.8■□□□□ 0.76
SUPT16H-205ENST00000556217 ZNF646O15015 1829 aaPredicted RBP19.8■□□□□ 0.76
SUPT16H-205ENST00000556217 NEURL1BA8MQ27 555 aa19.79■□□□□ 0.76
SUPT16H-205ENST00000556217 UBE2Q2LH0YL09 131 aa19.79■□□□□ 0.76
SUPT16H-205ENST00000556217 CWF19L2Q2TBE0 894 aaKnown RBP19.79■□□□□ 0.76
SUPT16H-205ENST00000556217 MOB2Q70IA6 237 aa19.79■□□□□ 0.76
SUPT16H-205ENST00000556217 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
SUPT16H-205ENST00000556217 ANKRD2Q9GZV1 360 aa19.79■□□□□ 0.76
SUPT16H-205ENST00000556217 WTIPA6NIX2 430 aaPredicted RBP19.78■□□□□ 0.76
SUPT16H-205ENST00000556217 WNT10BO00744 389 aa19.78■□□□□ 0.76
SUPT16H-205ENST00000556217 HABP4Q5JVS0 413 aaKnown RBP19.78■□□□□ 0.76
SUPT16H-205ENST00000556217 ZNF296Q8WUU4 475 aaPredicted RBP19.78■□□□□ 0.76
SUPT16H-205ENST00000556217 MXD3Q9BW11 206 aa19.78■□□□□ 0.76
SUPT16H-205ENST00000556217 SCAF8Q9UPN6 1271 aaKnown RBP19.78■□□□□ 0.76
SUPT16H-205ENST00000556217 H7C1W4 665 aa19.77■□□□□ 0.76
SUPT16H-205ENST00000556217 PRAMEF18Q5VWM3 479 aa19.77■□□□□ 0.76
SUPT16H-205ENST00000556217 FBXO46Q6PJ61 603 aaPredicted RBP19.77■□□□□ 0.76
SUPT16H-205ENST00000556217 TSR2Q969E8 191 aaKnown RBP19.77■□□□□ 0.76
SUPT16H-205ENST00000556217 MPHOSPH8Q99549 860 aa19.77■□□□□ 0.76
SUPT16H-205ENST00000556217 CACNA1FO60840 1977 aa19.77■□□□□ 0.75
SUPT16H-205ENST00000556217 ZNF804BA4D1E1 1349 aa19.76■□□□□ 0.75
SUPT16H-205ENST00000556217 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
SUPT16H-205ENST00000556217 TTLL5Q6EMB2 1281 aa19.76■□□□□ 0.75
SUPT16H-205ENST00000556217 APOBEC3FQ8IUX4 373 aaKnown RBP19.76■□□□□ 0.75
SUPT16H-205ENST00000556217 TBC1D8O95759 1140 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 ITGA6P23229 1130 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 KCNJ4P48050 445 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 TM4SF4P48230 202 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 SREBF2Q12772 1141 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 NOM1Q5C9Z4 860 aaKnown RBP19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 ARMC9Q7Z3E5 817 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 PLA2G12BQ9BX93 195 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
SUPT16H-205ENST00000556217 SASH1O94885 1247 aa19.74■□□□□ 0.75
SUPT16H-205ENST00000556217 GCKRQ14397 625 aa19.74■□□□□ 0.75
SUPT16H-205ENST00000556217 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
SUPT16H-205ENST00000556217 TXNRD3Q86VQ6 643 aa19.74■□□□□ 0.75
SUPT16H-205ENST00000556217 GPR25O00155 361 aa19.73■□□□□ 0.75
SUPT16H-205ENST00000556217 G2E3Q7L622 706 aa19.73■□□□□ 0.75
SUPT16H-205ENST00000556217 KIAA0825Q8IV33 1275 aa19.73■□□□□ 0.75
SUPT16H-205ENST00000556217 GTF2IP78347 998 aa19.72■□□□□ 0.75
SUPT16H-205ENST00000556217 FLIIQ13045 1269 aa19.72■□□□□ 0.75
SUPT16H-205ENST00000556217 COL1A1P02452 1464 aaPredicted RBP19.72■□□□□ 0.75
SUPT16H-205ENST00000556217 CSF1RP07333 972 aa19.71■□□□□ 0.75
SUPT16H-205ENST00000556217 MKRN3Q13064 507 aaKnown RBP19.71■□□□□ 0.75
SUPT16H-205ENST00000556217 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
SUPT16H-205ENST00000556217 WWC1Q8IX03 1113 aa19.71■□□□□ 0.75
SUPT16H-205ENST00000556217 ECM29Q5VYK3 1845 aa19.71■□□□□ 0.75
SUPT16H-205ENST00000556217 IL16Q14005 1332 aa19.71■□□□□ 0.75
SUPT16H-205ENST00000556217 ANKRD18BA2A2Z9 1011 aa19.7■□□□□ 0.74
SUPT16H-205ENST00000556217 KLRK1P26718 216 aa19.7■□□□□ 0.74
SUPT16H-205ENST00000556217 PTPN12Q05209 780 aaKnown RBP19.7■□□□□ 0.74
SUPT16H-205ENST00000556217 CHRNDQ07001 517 aa19.7■□□□□ 0.74
SUPT16H-205ENST00000556217 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
SUPT16H-205ENST00000556217 DNAAF4Q8WXU2 420 aa19.7■□□□□ 0.74
SUPT16H-205ENST00000556217 FKTNO75072 461 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 ALDH1A1P00352 501 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 CASP7P55210 303 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 PRKG1Q13976 671 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 DLGAP5Q15398 846 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 ZBED3Q96IU2 234 aaPredicted RBP19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 CFHR5Q9BXR6 569 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 CD209Q9NNX6 404 aa19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
SUPT16H-205ENST00000556217 LDLRAD1Q5T700 205 aa19.68■□□□□ 0.74
SUPT16H-205ENST00000556217 SPRYD7Q5W111 196 aa19.68■□□□□ 0.74
SUPT16H-205ENST00000556217 PPP2R3BQ9Y5P8 575 aa19.68■□□□□ 0.74
SUPT16H-205ENST00000556217 MYO1BO43795 1136 aa19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 INHBEP58166 350 aa19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 IFIT5Q13325 482 aaKnown RBP19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 C15orf52Q6ZUT6 534 aaKnown RBP19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 ZNF804AQ7Z570 1209 aa19.67■□□□□ 0.74
SUPT16H-205ENST00000556217 MTMR14Q8NCE2 650 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms