RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 HFE2Q6ZVN8 426 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 CCNJLQ8IV13 435 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 TCF12Q99081 682 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 OSMRQ99650 979 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 PBX4Q9BYU1 374 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 BCO2Q9BYV7 579 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 RBSNQ9H1K0 784 aa5.66□□□□□ -1.5
SRP54-209ENST00000555746 E9PSI1 815 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 GADD45BO75293 160 aaPredicted RBP5.65□□□□□ -1.5
SRP54-209ENST00000555746 CELA2BP08218 269 aaPredicted RBP5.65□□□□□ -1.5
SRP54-209ENST00000555746 BCRP11274 1271 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 CPB1P15086 417 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 EIF2AK2P19525 551 aaKnown RBP5.65□□□□□ -1.5
SRP54-209ENST00000555746 EIF4BP23588 611 aaKnown RBP5.65□□□□□ -1.5
SRP54-209ENST00000555746 ANKRD24Q8TF21 1146 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 EDARADDQ8WWZ3 215 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 NXPE3Q969Y0 559 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 PLD4Q96BZ4 506 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 FAM161BQ96MY7 647 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 EHD4Q9H223 541 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 LIN7BQ9HAP6 207 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 FAM8A1Q9UBU6 413 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 STARD13Q9Y3M8 1113 aa5.65□□□□□ -1.5
SRP54-209ENST00000555746 PDE2AO00408 941 aaPredicted RBP5.64□□□□□ -1.51
SRP54-209ENST00000555746 WIPF1O43516 503 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 SMNDC1O75940 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
SRP54-209ENST00000555746 RECKO95980 971 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 ITPKAP23677 461 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 ATP11AP98196 1134 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 PTPN12Q05209 780 aaKnown RBP5.64□□□□□ -1.51
SRP54-209ENST00000555746 LDLRAD1Q5T700 205 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 PSAPL1Q6NUJ1 521 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 ELMSAN1Q6PJG2 1045 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 NXPE4Q6UWF7 544 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 LYPD4Q6UWN0 246 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 GALNT6Q8NCL4 622 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 SMG9Q9H0W8 520 aaKnown RBP5.64□□□□□ -1.51
SRP54-209ENST00000555746 MRS2Q9HD23 443 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 ABCB6Q9NP58 842 aa5.64□□□□□ -1.51
SRP54-209ENST00000555746 BICRAQ9NZM4 1560 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 SHISA8B8ZZ34 492 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 TRPA1O75762 1119 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 CTSHP09668 335 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 XRCC5P13010 732 aaKnown RBP5.63□□□□□ -1.51
SRP54-209ENST00000555746 GRIK5Q16478 980 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 CHSY3Q70JA7 882 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 C3orf58Q8NDZ4 430 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 CRELD1Q96HD1 420 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 BTBD6Q96KE9 485 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 HHIPQ96QV1 700 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 POP1Q99575 1024 aaKnown RBP5.63□□□□□ -1.51
SRP54-209ENST00000555746 ADAM19Q9H013 955 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 PRDM6Q9NQX0 595 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 IGSF5Q9NSI5 407 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 PPP4R2Q9NY27 417 aa5.63□□□□□ -1.51
SRP54-209ENST00000555746 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
SRP54-209ENST00000555746 ALBP02768 609 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 GSTT1P30711 240 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 GRIA4P48058 902 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 CEP135Q66GS9 1140 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 ZNF385CQ66K41 422 aaPredicted RBP5.62□□□□□ -1.51
SRP54-209ENST00000555746 ILDR2Q71H61 639 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 MICALL1Q8N3F8 863 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 WHAMMQ8TF30 809 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 BACH2Q9BYV9 841 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 ZFYVE1Q9HBF4 777 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 VTI1BQ9UEU0 232 aa5.62□□□□□ -1.51
SRP54-209ENST00000555746 A0A096LPE4 126 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 A0A1W2PPZ6 126 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 HOXB4P17483 251 aaPredicted RBP5.61□□□□□ -1.51
SRP54-209ENST00000555746 PTPRAP18433 802 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 ADAMTSL4Q6UY14 1074 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 USP31Q70CQ4 1352 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 BSNDQ8WZ55 320 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 PPM1HQ9ULR3 514 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 SOX13Q9UN79 622 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 TRIM33Q9UPN9 1127 aa5.61□□□□□ -1.51
SRP54-209ENST00000555746 METTL12A8MUP2 240 aa5.6□□□□□ -1.51
SRP54-209ENST00000555746 LILRB5O75023 590 aa5.6□□□□□ -1.51
SRP54-209ENST00000555746 ARHGEF15O94989 841 aa5.6□□□□□ -1.51
SRP54-209ENST00000555746 ST13P50502 369 aaKnown RBP5.6□□□□□ -1.51
SRP54-209ENST00000555746 AFF1P51825 1210 aaKnown RBP5.6□□□□□ -1.51
SRP54-209ENST00000555746 FCGRTP55899 365 aa5.6□□□□□ -1.51
SRP54-209ENST00000555746 COL9A3Q14050 684 aaPredicted RBP5.6□□□□□ -1.51
SRP54-209ENST00000555746 RPS26P11Q5JNZ5 115 aaPredicted RBP5.6□□□□□ -1.51
SRP54-209ENST00000555746 NUDT8Q8WV74 236 aa5.6□□□□□ -1.51
SRP54-209ENST00000555746 ZNF576Q9H609 170 aa5.6□□□□□ -1.51
SRP54-209ENST00000555746 JPH1Q9HDC5 661 aaPredicted RBP5.6□□□□□ -1.51
SRP54-209ENST00000555746 METTL5Q9NRN9 209 aaKnown RBP5.6□□□□□ -1.51
SRP54-209ENST00000555746 M0R082 166 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.51
SRP54-209ENST00000555746 BAG6P46379 1132 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 DGKGP49619 791 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 MAP3K10Q02779 954 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 SPRED3Q2MJR0 410 aa5.59□□□□□ -1.51
SRP54-209ENST00000555746 TSNAXIP1Q2TAA8 658 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms