RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 THSD7BQ9C0I4 1608 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 SHTN1A0MZ66 631 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
VRK1-204ENST00000555351 TRAF5O00463 557 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
VRK1-204ENST00000555351 ECE1P42892 770 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 VEGFBP49765 207 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 TBC1D10BQ4KMP7 808 aaPredicted RBP14.92□□□□□ -0.02
VRK1-204ENST00000555351 TAF7LQ5H9L4 462 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 DACT2Q5SW24 774 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 GLIS2Q9BZE0 524 aaPredicted RBP14.92□□□□□ -0.02
VRK1-204ENST00000555351 SMC4Q9NTJ3 1288 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 ABT1Q9ULW3 272 aaKnown RBP14.92□□□□□ -0.02
VRK1-204ENST00000555351 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
VRK1-204ENST00000555351 HSPA1AP0DMV8 641 aaKnown RBP14.91□□□□□ -0.02
VRK1-204ENST00000555351 HSPA1BP0DMV9 641 aaKnown RBP14.91□□□□□ -0.02
VRK1-204ENST00000555351 TXNRD3Q86VQ6 643 aa14.91□□□□□ -0.02
VRK1-204ENST00000555351 DCPSQ96C86 337 aaKnown RBP14.91□□□□□ -0.02
VRK1-204ENST00000555351 SUCLG2Q96I99 432 aa14.91□□□□□ -0.02
VRK1-204ENST00000555351 CELF2O95319 508 aaKnown RBP14.9□□□□□ -0.02
VRK1-204ENST00000555351 EGFRP00533 1210 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 UBE4AQ14139 1066 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 KRT26Q7Z3Y9 468 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 SAPCD2Q86UD0 394 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 OGFOD1Q8N543 542 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 MYOZ2Q9NPC6 264 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 CNNM1Q9NRU3 951 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
VRK1-204ENST00000555351 WDR33Q9C0J8 1336 aaKnown RBP14.9□□□□□ -0.02
VRK1-204ENST00000555351 IL1R1P14778 569 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 FKBP1AP62942 108 aaKnown RBP14.89□□□□□ -0.03
VRK1-204ENST00000555351 FMR1Q06787 632 aaKnown RBP eCLIP14.89□□□□□ -0.03
VRK1-204ENST00000555351 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
VRK1-204ENST00000555351 TTLL5Q6EMB2 1281 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 ZNF804AQ7Z570 1209 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 USP48Q86UV5 1035 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 API5Q9BZZ5 524 aaKnown RBP14.89□□□□□ -0.03
VRK1-204ENST00000555351 BICC1Q9H694 974 aaKnown RBP14.89□□□□□ -0.03
VRK1-204ENST00000555351 CD209Q9NNX6 404 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 MROH5Q6ZUA9 1318 aa14.89□□□□□ -0.03
VRK1-204ENST00000555351 TAF5LO75529 589 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 KLRK1P26718 216 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 MAP2K2P36507 400 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 MAP2K1Q02750 393 aaPredicted RBP14.88□□□□□ -0.03
VRK1-204ENST00000555351 RBM26Q5T8P6 1007 aaKnown RBP14.88□□□□□ -0.03
VRK1-204ENST00000555351 ANKRD44Q8N8A2 993 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 ZNF594Q96JF6 807 aaPredicted RBP14.88□□□□□ -0.03
VRK1-204ENST00000555351 WBP1LQ9NX94 342 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 RIPOR2Q9Y4F9 1068 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
VRK1-204ENST00000555351 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
VRK1-204ENST00000555351 SCARF1Q14162 830 aa14.87□□□□□ -0.03
VRK1-204ENST00000555351 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
VRK1-204ENST00000555351 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
VRK1-204ENST00000555351 CAPNS2Q96L46 248 aa14.87□□□□□ -0.03
VRK1-204ENST00000555351 GGA3Q9NZ52 723 aa14.87□□□□□ -0.03
VRK1-204ENST00000555351 HDAC9Q9UKV0 1011 aa14.87□□□□□ -0.03
VRK1-204ENST00000555351 GTF2IP78347 998 aa14.86□□□□□ -0.03
VRK1-204ENST00000555351 AIDAQ96BJ3 306 aa14.86□□□□□ -0.03
VRK1-204ENST00000555351 SASH1O94885 1247 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 FKBP1BP68106 108 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 MIER1Q8N108 512 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 C2orf69Q8N8R5 385 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 MTMR14Q8NCE2 650 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 FBXO3Q9UK99 471 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
VRK1-204ENST00000555351 POLR2AP24928 1970 aaKnown RBP14.85□□□□□ -0.03
VRK1-204ENST00000555351 FAM205AQ6ZU69 1335 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 PCNTO95613 3336 aa14.85□□□□□ -0.03
VRK1-204ENST00000555351 WNT10BO00744 389 aa14.84□□□□□ -0.03
VRK1-204ENST00000555351 IPO8O15397 1037 aaKnown RBP14.84□□□□□ -0.03
VRK1-204ENST00000555351 CTCFP49711 727 aaPredicted RBP14.84□□□□□ -0.03
VRK1-204ENST00000555351 ANGEL2Q5VTE6 544 aaKnown RBP14.84□□□□□ -0.03
VRK1-204ENST00000555351 ZBED3Q96IU2 234 aaPredicted RBP14.84□□□□□ -0.03
VRK1-204ENST00000555351 PUS3Q9BZE2 481 aaKnown RBP14.84□□□□□ -0.03
VRK1-204ENST00000555351 GBA2Q9HCG7 927 aaPredicted RBP14.84□□□□□ -0.03
VRK1-204ENST00000555351 PRDM10Q9NQV6 1147 aa14.84□□□□□ -0.03
VRK1-204ENST00000555351 ADM5C9JUS6 153 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 SNAP23O00161 211 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 PLIN1O60240 522 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 PDE8BO95263 885 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 UBTFL1P0CB47 393 aaPredicted RBP14.83□□□□□ -0.04
VRK1-204ENST00000555351 HIBADHP31937 336 aaKnown RBP14.83□□□□□ -0.04
VRK1-204ENST00000555351 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.04
VRK1-204ENST00000555351 CYP4F22Q6NT55 531 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.04
VRK1-204ENST00000555351 FBXW7Q969H0 707 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 MXD3Q9BW11 206 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 ZNF408Q9H9D4 720 aa14.83□□□□□ -0.04
VRK1-204ENST00000555351 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
VRK1-204ENST00000555351 FOXN1O15353 648 aa14.82□□□□□ -0.04
VRK1-204ENST00000555351 HUNKP57058 714 aa14.82□□□□□ -0.04
VRK1-204ENST00000555351 NOGQ13253 232 aa14.82□□□□□ -0.04
VRK1-204ENST00000555351 NBPF9Q3BBW0 867 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 519.6 ms