RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 DBF4Q9UBU7 674 aaPredicted RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 MKRN1Q9UHC7 482 aaKnown RBP6.53□□□□□ -1.36
LINC00871-201ENST00000555246 ZNRF3Q9ULT6 936 aa6.53□□□□□ -1.36
LINC00871-201ENST00000555246 ANXA1P04083 346 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 EIF2S2P20042 333 aaKnown RBP6.52□□□□□ -1.37
LINC00871-201ENST00000555246 EPS15P42566 896 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 MAP2K1Q02750 393 aaPredicted RBP6.52□□□□□ -1.37
LINC00871-201ENST00000555246 AOC3Q16853 763 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 FAM163AQ96GL9 167 aaPredicted RBP6.52□□□□□ -1.37
LINC00871-201ENST00000555246 TMX4Q9H1E5 349 aaPredicted RBP6.52□□□□□ -1.37
LINC00871-201ENST00000555246 NPDC1Q9NQX5 325 aaPredicted RBP6.52□□□□□ -1.37
LINC00871-201ENST00000555246 HYPKQ9NX55 129 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 CHPF2Q9P2E5 772 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 TRMT112Q9UI30 125 aaKnown RBP6.52□□□□□ -1.37
LINC00871-201ENST00000555246 TLL2Q9Y6L7 1015 aa6.52□□□□□ -1.37
LINC00871-201ENST00000555246 WDR33Q9C0J8 1336 aaKnown RBP6.51□□□□□ -1.37
LINC00871-201ENST00000555246 YDJCA8MPS7 323 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
LINC00871-201ENST00000555246 ECE1P42892 770 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 FLIIQ13045 1269 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 KRT24Q2M2I5 525 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 DEFB115Q30KQ5 88 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 CST9Q5W186 159 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 CIAPIN1Q6FI81 312 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 DPP8Q6V1X1 898 aaPredicted RBP6.51□□□□□ -1.37
LINC00871-201ENST00000555246 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 DDX46Q7L014 1031 aaKnown RBP6.51□□□□□ -1.37
LINC00871-201ENST00000555246 SAPCD2Q86UD0 394 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 DPF2Q92785 391 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 C1orf115Q9H7X2 142 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 PRKRIP1Q9H875 184 aaPredicted RBP6.51□□□□□ -1.37
LINC00871-201ENST00000555246 CDHR5Q9HBB8 845 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 IFT57Q9NWB7 429 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 PODXL2Q9NZ53 605 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 ADAMTS8Q9UP79 889 aa6.51□□□□□ -1.37
LINC00871-201ENST00000555246 COL4A1P02462 1669 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 CA12O43570 354 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 HSPA8P11142 646 aaKnown RBP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 HSP90B1P14625 803 aaKnown RBP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 RPS12P25398 132 aaKnown RBP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 MAP2K2P36507 400 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 GMPSP49915 693 aaPredicted RBP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 CALD1Q05682 793 aaKnown RBP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 TNIP1Q15025 636 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 WDR43Q15061 677 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 DUSP27Q5VZP5 1158 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 MPNDQ8N594 471 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 ZBTB38Q8NAP3 1195 aaPredicted RBP6.5□□□□□ -1.37
LINC00871-201ENST00000555246 AIDAQ96BJ3 306 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 CHMP4AQ9BY43 222 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 GJA3Q9Y6H8 435 aa6.5□□□□□ -1.37
LINC00871-201ENST00000555246 RTL9Q8NET4 1388 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 SLC34A2O95436 690 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 HIRAP54198 1017 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-201ENST00000555246 GNAI1P63096 354 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
LINC00871-201ENST00000555246 CCDC146Q8IYE0 955 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 CCDC191Q8NCU4 936 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 CELF1Q92879 486 aaKnown RBP6.49□□□□□ -1.37
LINC00871-201ENST00000555246 CAPNS2Q96L46 248 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 TRPM7Q96QT4 1865 aa6.49□□□□□ -1.37
LINC00871-201ENST00000555246 TRAF5O00463 557 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 IRS4O14654 1257 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-201ENST00000555246 PCCAP05165 728 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-201ENST00000555246 LBX1P52954 281 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 DDX10Q13206 875 aaKnown RBP6.48□□□□□ -1.37
LINC00871-201ENST00000555246 CCDC27Q2M243 656 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 WASHC4Q2M389 1173 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 CDC37L1Q7L3B6 337 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 TRPM4Q8TD43 1214 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 FAM89AQ96GI7 184 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 PCMTD1Q96MG8 357 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-201ENST00000555246 GPR101Q96P66 508 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-201ENST00000555246 EPAS1Q99814 870 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 PCDH10Q9P2E7 1040 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 POLLQ9UGP5 575 aa6.48□□□□□ -1.37
LINC00871-201ENST00000555246 ABT1Q9ULW3 272 aaKnown RBP6.48□□□□□ -1.37
LINC00871-201ENST00000555246 H7C1D1 291 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 PSMD14O00487 310 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 TCERG1O14776 1098 aaKnown RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 RAD17O75943 681 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 CELF2O95319 508 aaKnown RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 VIL1P09327 827 aaKnown RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 ZNF280AP59817 542 aaPredicted RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 RPS8P62241 208 aaKnown RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 FMR1Q06787 632 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 NOGQ13253 232 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 TBC1D16Q8TBP0 767 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 PHOX2BQ99453 314 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 EYA3Q99504 573 aa6.47□□□□□ -1.37
LINC00871-201ENST00000555246 GLIS2Q9BZE0 524 aaPredicted RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 CNOT7Q9UIV1 285 aaKnown RBP6.47□□□□□ -1.37
LINC00871-201ENST00000555246 PSME4Q14997 1843 aa6.46□□□□□ -1.37
LINC00871-201ENST00000555246 ATP5J2-PTCD1G3V325 749 aa6.46□□□□□ -1.38
LINC00871-201ENST00000555246 APAF1O14727 1248 aa6.46□□□□□ -1.38
LINC00871-201ENST00000555246 MAP3K7O43318 606 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms