RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-208ENST00000554929 TEFQ10587 303 aa13.15□□□□□ -0.3
SRSF5-208ENST00000554929 KHSRPQ92945 711 aaKnown RBP eCLIP13.15□□□□□ -0.31e-19■■■■□ 26.1
SRSF5-208ENST00000554929 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
SRSF5-208ENST00000554929 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
SRSF5-208ENST00000554929 HMOX1P09601 288 aa13.14□□□□□ -0.31
SRSF5-208ENST00000554929 HOXA10P31260 410 aaPredicted RBP13.14□□□□□ -0.31
SRSF5-208ENST00000554929 IL13P35225 146 aa13.14□□□□□ -0.31
SRSF5-208ENST00000554929 SUPT20HQ8NEM7 779 aa13.14□□□□□ -0.31
SRSF5-208ENST00000554929 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
SRSF5-208ENST00000554929 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 H0YGN5 161 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 EGFRP00533 1210 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 HLFQ16534 295 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
SRSF5-208ENST00000554929 SULF1Q8IWU6 871 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 CRAMP1Q96RY5 1269 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 TRIM17Q9Y577 477 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
SRSF5-208ENST00000554929 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
SRSF5-208ENST00000554929 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■□□□□ 10.8
SRSF5-208ENST00000554929 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
SRSF5-208ENST00000554929 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
SRSF5-208ENST00000554929 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
SRSF5-208ENST00000554929 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
SRSF5-208ENST00000554929 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
SRSF5-208ENST00000554929 YDJCA8MPS7 323 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 KCNQ3O43525 872 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 PDE4AP27815 886 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 DPP8Q6V1X1 898 aaPredicted RBP13.11□□□□□ -0.31
SRSF5-208ENST00000554929 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 IL16Q14005 1332 aa13.11□□□□□ -0.31
SRSF5-208ENST00000554929 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
SRSF5-208ENST00000554929 TM4SF4P48230 202 aa13.1□□□□□ -0.31
SRSF5-208ENST00000554929 KIAA2012Q0VF49 1180 aa13.1□□□□□ -0.31
SRSF5-208ENST00000554929 DPF2Q92785 391 aa13.1□□□□□ -0.31
SRSF5-208ENST00000554929 IPO9Q96P70 1041 aaKnown RBP13.1□□□□□ -0.31
SRSF5-208ENST00000554929 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
SRSF5-208ENST00000554929 BACH2Q9BYV9 841 aa13.1□□□□□ -0.31
SRSF5-208ENST00000554929 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
SRSF5-208ENST00000554929 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
SRSF5-208ENST00000554929 PSMD14O00487 310 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 OTOP1Q7RTM1 612 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 MPNDQ8N594 471 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 GGA3Q9NZ52 723 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
SRSF5-208ENST00000554929 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
SRSF5-208ENST00000554929 PITPNM2Q9BZ72 1349 aa13.09□□□□□ -0.31
SRSF5-208ENST00000554929 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
SRSF5-208ENST00000554929 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
SRSF5-208ENST00000554929 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
SRSF5-208ENST00000554929 NEFMP07197 916 aa13.08□□□□□ -0.32
SRSF5-208ENST00000554929 ASTN2O75129 1339 aaPredicted RBP13.08□□□□□ -0.32
SRSF5-208ENST00000554929 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
SRSF5-208ENST00000554929 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
SRSF5-208ENST00000554929 BCAR3O75815 825 aa13.07□□□□□ -0.32
SRSF5-208ENST00000554929 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
SRSF5-208ENST00000554929 FKBP1BP68106 108 aa13.07□□□□□ -0.32
SRSF5-208ENST00000554929 KIF4BQ2VIQ3 1234 aa13.07□□□□□ -0.32
SRSF5-208ENST00000554929 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
SRSF5-208ENST00000554929 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
SRSF5-208ENST00000554929 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
SRSF5-208ENST00000554929 GPTP24298 496 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 FOXK1P85037 733 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 SREBF2Q12772 1141 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 PTPN22Q9Y2R2 807 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
SRSF5-208ENST00000554929 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
SRSF5-208ENST00000554929 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
SRSF5-208ENST00000554929 TMPOP42166 694 aaKnown RBP13.05□□□□□ -0.32
SRSF5-208ENST00000554929 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
SRSF5-208ENST00000554929 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 SP8Q8IXZ3 490 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
SRSF5-208ENST00000554929 RRP7AQ9Y3A4 280 aaKnown RBP13.05□□□□□ -0.32
SRSF5-208ENST00000554929 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
SRSF5-208ENST00000554929 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
SRSF5-208ENST00000554929 ANGEL2Q5VTE6 544 aaKnown RBP13.04□□□□□ -0.32
SRSF5-208ENST00000554929 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
SRSF5-208ENST00000554929 DBNDD1Q9H9R9 158 aa13.04□□□□□ -0.32
SRSF5-208ENST00000554929 ABCC4O15439 1325 aa13.04□□□□□ -0.32
SRSF5-208ENST00000554929 SIPA1L3O60292 1781 aaPredicted RBP13.03□□□□□ -0.32
SRSF5-208ENST00000554929 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
SRSF5-208ENST00000554929 SLC4A8Q2Y0W8 1093 aa13.03□□□□□ -0.32
SRSF5-208ENST00000554929 DPF3Q92784 378 aa13.03□□□□□ -0.32
SRSF5-208ENST00000554929 SCAF8Q9UPN6 1271 aaKnown RBP13.03□□□□□ -0.32
SRSF5-208ENST00000554929 A0A0C4DFX4 3053 aa13.02□□□□□ -0.32
SRSF5-208ENST00000554929 COL6A3P12111 3177 aa13.02□□□□□ -0.32
SRSF5-208ENST00000554929 BBOX1O75936 387 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms