RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 LTBP1Q14766 1721 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 MCAMP43121 646 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 KCNJ4P48050 445 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 FKBP4Q02790 459 aaKnown RBP eCLIP21.3■■□□□ 1
PSEN1-206ENST00000553447 TMC4Q7Z404 712 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 TICAM2Q86XR7 235 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 RUFY2Q8WXA3 655 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 SNRKQ9NRH2 765 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 DLEC1Q9Y238 1755 aa21.3■■□□□ 1
PSEN1-206ENST00000553447 WTIPA6NIX2 430 aaPredicted RBP21.29■■□□□ 1
PSEN1-206ENST00000553447 SGSM2O43147 1006 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 ZAP70P43403 619 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 RBM25P49756 843 aaKnown RBP21.29■■□□□ 1
PSEN1-206ENST00000553447 CWC27Q6UX04 472 aaKnown RBP21.29■■□□□ 1
PSEN1-206ENST00000553447 MASTLQ96GX5 879 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 USP26Q9BXU7 913 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 KIF13BQ9NQT8 1826 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 ZNF804BA4D1E1 1349 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 XDHP47989 1333 aa21.29■■□□□ 1
PSEN1-206ENST00000553447 BCAMP50895 628 aa21.28■■□□□ 1
PSEN1-206ENST00000553447 NMIQ13287 307 aaPredicted RBP21.28■■□□□ 1
PSEN1-206ENST00000553447 C2CD5Q86YS7 1000 aa21.28■■□□□ 1
PSEN1-206ENST00000553447 IL25Q9H293 177 aa21.28■■□□□ 1
PSEN1-206ENST00000553447 ANTXR1Q9H6X2 564 aa21.28■■□□□ 1
PSEN1-206ENST00000553447 LEMD3Q9Y2U8 911 aa21.28■■□□□ 1
PSEN1-206ENST00000553447 C10orf71Q711Q0 1435 aa21.28■■□□□ 1
PSEN1-206ENST00000553447 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
PSEN1-206ENST00000553447 ALDH1B1P30837 517 aa21.27■■□□□ 1
PSEN1-206ENST00000553447 PI16Q6UXB8 463 aa21.27■■□□□ 1
PSEN1-206ENST00000553447 SLC51AQ86UW1 340 aa21.27■■□□□ 1
PSEN1-206ENST00000553447 ANKIB1Q9P2G1 1089 aa21.27■■□□□ 1
PSEN1-206ENST00000553447 RAD50Q92878 1312 aa21.27■□□□□ 0.99
PSEN1-206ENST00000553447 GYG1P46976 350 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 GPSM2P81274 684 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 CAVIN4Q5BKX8 364 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 STYK1Q6J9G0 422 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 SP8Q8IXZ3 490 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 FAM227BQ96M60 508 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 HMG20BQ9P0W2 317 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 IRS2Q9Y4H2 1338 aa21.26■□□□□ 0.99
PSEN1-206ENST00000553447 H0YIN7 160 aa21.25■□□□□ 0.99
PSEN1-206ENST00000553447 RASGRF1Q13972 1273 aa21.25■□□□□ 0.99
PSEN1-206ENST00000553447 FBXO33Q7Z6M2 555 aa21.25■□□□□ 0.99
PSEN1-206ENST00000553447 SPATA5Q8NB90 893 aa21.25■□□□□ 0.99
PSEN1-206ENST00000553447 FAM84BQ96KN1 310 aaPredicted RBP21.25■□□□□ 0.99
PSEN1-206ENST00000553447 ANO2Q9NQ90 1003 aa21.25■□□□□ 0.99
PSEN1-206ENST00000553447 GNL3LQ9NVN8 582 aaKnown RBP21.25■□□□□ 0.99
PSEN1-206ENST00000553447 ATP6V0A2Q9Y487 856 aa21.25■□□□□ 0.99
PSEN1-206ENST00000553447 A0A0D9SFI3 127 aa21.24■□□□□ 0.99
PSEN1-206ENST00000553447 EPB41L2O43491 1005 aaKnown RBP21.24■□□□□ 0.99
PSEN1-206ENST00000553447 CYP2E1P05181 493 aaPredicted RBP21.24■□□□□ 0.99
PSEN1-206ENST00000553447 ATP2B4P23634 1241 aa21.24■□□□□ 0.99
PSEN1-206ENST00000553447 KLRK1P26718 216 aa21.24■□□□□ 0.99
PSEN1-206ENST00000553447 TTF1Q15361 905 aaPredicted RBP21.24■□□□□ 0.99
PSEN1-206ENST00000553447 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
PSEN1-206ENST00000553447 SLX4Q8IY92 1834 aa21.24■□□□□ 0.99
PSEN1-206ENST00000553447 MED23Q9ULK4 1368 aa21.23■□□□□ 0.99
PSEN1-206ENST00000553447 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
PSEN1-206ENST00000553447 ZNF622Q969S3 477 aaKnown RBP eCLIP21.23■□□□□ 0.99
PSEN1-206ENST00000553447 NSFL1CQ9UNZ2 370 aaKnown RBP21.23■□□□□ 0.99
PSEN1-206ENST00000553447 RNF113AO15541 343 aaKnown RBP21.22■□□□□ 0.99
PSEN1-206ENST00000553447 ZBTB7AO95365 584 aa21.22■□□□□ 0.99
PSEN1-206ENST00000553447 R3HDM1Q15032 1099 aaKnown RBP21.22■□□□□ 0.99
PSEN1-206ENST00000553447 KIAA1211Q6ZU35 1233 aa21.22■□□□□ 0.99
PSEN1-206ENST00000553447 C15orf52Q6ZUT6 534 aaKnown RBP21.22■□□□□ 0.99
PSEN1-206ENST00000553447 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
PSEN1-206ENST00000553447 MTFR1LQ9H019 292 aa21.22■□□□□ 0.99
PSEN1-206ENST00000553447 LSG1Q9H089 658 aaKnown RBP21.22■□□□□ 0.99
PSEN1-206ENST00000553447 PIH1D3Q9NQM4 214 aaKnown RBP21.22■□□□□ 0.99
PSEN1-206ENST00000553447 GGA1Q9UJY5 639 aa21.22■□□□□ 0.99
PSEN1-206ENST00000553447 COL1A1P02452 1464 aaPredicted RBP21.21■□□□□ 0.99
PSEN1-206ENST00000553447 SEMA3EO15041 775 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 ZBTB22O15209 634 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 UFL1O94874 794 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 CHGBP05060 677 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 ZFYP08048 801 aaPredicted RBP21.21■□□□□ 0.99
PSEN1-206ENST00000553447 CHRNA5P30532 468 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 HIBADHP31937 336 aaKnown RBP21.21■□□□□ 0.99
PSEN1-206ENST00000553447 ZMYM1Q5SVZ6 1142 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 HELLSQ9NRZ9 838 aa21.21■□□□□ 0.99
PSEN1-206ENST00000553447 DUOX1Q9NRD9 1551 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 MCMDC2Q4G0Z9 681 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 TXNRD3Q86VQ6 643 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 CNKSR1Q969H4 720 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 DDRGK1Q96HY6 314 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.2■□□□□ 0.98
PSEN1-206ENST00000553447 DENND2AQ9ULE3 1009 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 IQSEC3Q9UPP2 1182 aaPredicted RBP21.2■□□□□ 0.98
PSEN1-206ENST00000553447 KIAA1551Q9HCM1 1747 aa21.2■□□□□ 0.98
PSEN1-206ENST00000553447 ZSCAN25Q6NSZ9 544 aa21.19■□□□□ 0.98
PSEN1-206ENST00000553447 TBC1D16Q8TBP0 767 aa21.19■□□□□ 0.98
PSEN1-206ENST00000553447 PDS5AQ29RF7 1337 aaKnown RBP21.19■□□□□ 0.98
PSEN1-206ENST00000553447 MCCP23508 829 aa21.18■□□□□ 0.98
PSEN1-206ENST00000553447 POLD1P28340 1107 aa21.18■□□□□ 0.98
PSEN1-206ENST00000553447 KIF2CQ99661 725 aa21.18■□□□□ 0.98
PSEN1-206ENST00000553447 ATF5Q9Y2D1 282 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-206ENST00000553447 CCDC171Q6TFL3 1326 aa21.18■□□□□ 0.98
PSEN1-206ENST00000553447 IDH1O75874 414 aaKnown RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 ADD2P35612 726 aa21.17■□□□□ 0.98
PSEN1-206ENST00000553447 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms