RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
HNRNPC-205ENST00000553300 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
HNRNPC-205ENST00000553300 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
HNRNPC-205ENST00000553300 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
HNRNPC-205ENST00000553300 CNTNAP1P78357 1384 aa16.53■□□□□ 0.24
HNRNPC-205ENST00000553300 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
HNRNPC-205ENST00000553300 USP17L8P0C7I0 530 aa16.53■□□□□ 0.24
HNRNPC-205ENST00000553300 ZNF280AP59817 542 aaPredicted RBP16.53■□□□□ 0.24
HNRNPC-205ENST00000553300 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
HNRNPC-205ENST00000553300 SHTN1A0MZ66 631 aa16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 TBC1D10BQ4KMP7 808 aaPredicted RBP16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 GMLQ99445 158 aa16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 MKRN1Q9UHC7 482 aaKnown RBP16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 TRPM7Q96QT4 1865 aa16.52■□□□□ 0.24
HNRNPC-205ENST00000553300 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 IPO8O15397 1037 aaKnown RBP16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 TAF5LO75529 589 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 KIF4BQ2VIQ3 1234 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 UBE4AQ14139 1066 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 DEFB115Q30KQ5 88 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 CD209Q9NNX6 404 aa16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 ABT1Q9ULW3 272 aaKnown RBP16.51■□□□□ 0.23
HNRNPC-205ENST00000553300 TRAF5O00463 557 aa16.5■□□□□ 0.23
HNRNPC-205ENST00000553300 CST9Q5W186 159 aa16.5■□□□□ 0.23
HNRNPC-205ENST00000553300 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
HNRNPC-205ENST00000553300 MYOZ2Q9NPC6 264 aa16.5■□□□□ 0.23
HNRNPC-205ENST00000553300 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
HNRNPC-205ENST00000553300 IRS2Q9Y4H2 1338 aa16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 PLIN1O60240 522 aa16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 EGFRP00533 1210 aa16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 UBTFL1P0CB47 393 aaPredicted RBP16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 KLRK1P26718 216 aa16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
HNRNPC-205ENST00000553300 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
HNRNPC-205ENST00000553300 IL1R1P14778 569 aa16.48■□□□□ 0.23
HNRNPC-205ENST00000553300 VEGFBP49765 207 aa16.48■□□□□ 0.23
HNRNPC-205ENST00000553300 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
HNRNPC-205ENST00000553300 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
HNRNPC-205ENST00000553300 HDAC9Q9UKV0 1011 aa16.48■□□□□ 0.23
HNRNPC-205ENST00000553300 POLR2AP24928 1970 aaKnown RBP16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 SNAP23O00161 211 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 ECE1P42892 770 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 GTF2IP78347 998 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 FMR1Q06787 632 aaKnown RBP eCLIP16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 SCARF1Q14162 830 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 INTS3Q68E01 1043 aaKnown RBP16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 HHIPL1Q96JK4 782 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 TLL2Q9Y6L7 1015 aa16.47■□□□□ 0.23
HNRNPC-205ENST00000553300 PITPNM2Q9BZ72 1349 aa16.46■□□□□ 0.23
HNRNPC-205ENST00000553300 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
HNRNPC-205ENST00000553300 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
HNRNPC-205ENST00000553300 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
HNRNPC-205ENST00000553300 SASH1O94885 1247 aa16.45■□□□□ 0.22
HNRNPC-205ENST00000553300 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
HNRNPC-205ENST00000553300 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
HNRNPC-205ENST00000553300 SAPCD2Q86UD0 394 aa16.45■□□□□ 0.22
HNRNPC-205ENST00000553300 GGA3Q9NZ52 723 aa16.45■□□□□ 0.22
HNRNPC-205ENST00000553300 WDR33Q9C0J8 1336 aaKnown RBP16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 PDE8BO95263 885 aa16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 GNAI3P08754 354 aa16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 MXD3Q9BW11 206 aa16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 ZNF646O15015 1829 aaPredicted RBP16.44■□□□□ 0.22
HNRNPC-205ENST00000553300 EYA2O00167 538 aa16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 HSPA1AP0DMV8 641 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 HSPA1BP0DMV9 641 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 CAVIN4Q5BKX8 364 aa16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 ANGEL2Q5VTE6 544 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 KIAA0825Q8IV33 1275 aa16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 TDRD7Q8NHU6 1098 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
HNRNPC-205ENST00000553300 WNT10BO00744 389 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 BCAR3O75815 825 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 TRIM27P14373 513 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 VGLL2Q8N8G2 317 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms